LeishBase: Leishmania Structural Database
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Histone H4 [Q9GRP6]
Systematic NameLMJ_0086 [Leishmania major]
Gene NameL7845.05
Molecular Weight11439 Da
Protein Sequence Size100
Function
Charge17.5
Isoelectric Point11.1372 pH
DescriptionHistone H4.
Subcellular LocationN.A.[Predict]
E. C. Number N.A.
Sequence>tr|Q9GRP6|Q9GRP6_LEIMA Histone H4 - Leishmania major.
AKGKRSTDAKGSQRRQKKVLRDNIRGITRGCVRRMARRGGVKRISSEVYEEVRRVLKAYV
EDIVRCSTAYTEYARKKTVTACDVVTALRKQGHILYGYA
DNA Sequence
Histone H4 Q9GRP6]
Metabolite Information
Molecular Function
Biochemical Pathway
Regulatory Pathway
KEGG Pathways
Orthologs
Homologs GI Percent Identity Evalue Score
Homo sapiensPREDICTED: similar to germinal histone H4 gene isoform 4 [Homo sapiens]598e-27115
DEG Information
DEG Protein DEG Organism Percent Identity Evalue Bit Score
Rv2242 hypothetical proteinMycobacterium tuberculosis H37Rv28%1.824.3
Post Translational Modification
PTM Type PTM Sub Type Score Modification Site Prosite ID
AcylationN-myristoylation site27-32; PS00008
AmidationAmidation site3-6; PS00009
PhosphorylationcAMP- and cGMP-dependent protein kinase phosphorylation site5-8; 43-46; 76-79; PS00004
PhosphorylationCasein kinase II phosphorylation site81-84; PS00006
PhosphorylationProtein kinase C phosphorylation site13-15; PS00005
Histone H4 [Q9GRP6]
Model Information
Template PDB ID1id3F
Percent Identity59%
Target Region17-100
Template Region18-85
Domain Information
Domains Start End
Active Site Information
Residue Active Site Number Functional Part
Co-Factor
Metal Description
Ligands
CAS number Name Mol. Weight Mol. Formula Smile Notation PDB Reference
16397-91-4MANGANESE (II) ION54.938Mn[Mn+2]1id3
Mutational Information
Residue Feature Description
Modeled Protein Template Structure
+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/5926080/Q9GRP6.pdb 2.0 84 = residues | | = | | Ramachandran plot: 97.4% core 2.6% allow 0.0% gener 0.0% = disall | | = | | All Ramachandrans: 0 labelled residues (out of 82) = | +| Chi1-chi2 plots: 1 labelled residues (out of 48) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 2.5 Bad contacts: = 0 | *| Bond len/angle: 5.4 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.25 Covalent: -0.10 Overall: = 0.12 | | = | | M/c bond lengths:100.0% within limits 0.0% highlighted = | | M/c bond angles: 96.9% within limits 3.1% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further.
Overlapped Structure Procheck Summary
LeishBase: Leishmania Structural Database