| Small myristoylated protein 1 [Q5SDH5] | |
|---|---|
| Systematic Name | LmjF.20.1310 [Leishmania major] |
| Gene Name | SMP-1 |
| Molecular Weight | 14989 Da |
| Protein Sequence Size | 131 |
| Function | |
| Charge | -3 |
| Isoelectric Point | 5.0208 pH |
| Description | Small myristoylated protein 1 (Calpain-like cysteine peptidase, putative) (Calpain-like cysteine peptidase, clan ca, family c2). |
| Subcellular Location | N.A.[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q5SDH5|Q5SDH5_LEIMA Small myristoylated protein 1 (Calpain-like cysteine peptidase, putative) (Calpain-like cysteine peptidase, clan ca, family c2) - Leishmania major. GCGASSENSSVTYVNGRPTFVGEEVTKGFEKDNGLLFRIVNKKKKQWAYYNDTTQYEMHV LVTFNEDCDIKALGKTKLEQQENGEWVASVVVYPCETEMFIEGRVNGFKSKMDALPLSEE YRQHQAEKDK |
| DNA Sequence | >LmjF20.1310 |||calpain-like cysteine peptidase, putative|Leishmania major|chr 20|||Manual ATGGGCTGCG GTGCTTCTTC TGAGAACAGC AGCGTCACGT ACGTGAACGG CAGGCCCACCTTCGTGGGTG AGGAGGTGAC GAAGGGCTTT GAGAAGGACA ATGGGCTGCT TTTCCGCATCGTGAACAAGA AGAAGAAGCA GTGGGCGTAC TACAACGACA CGACGCAGTA CGAAATGCACGTGCTGGTCA CCTTCAACGA GGACTGTGAC ATCAAGGCTC TTGGCAAGAC GAAGCTGGAGCAGCAGGAGA ACGGTGAGTG GGTAGCCTCC GTGGTGGTGT ACCCGTGCGA GACGGAGATGTTCATCGAAG GCCGCGTGAA CGGCTTCAAG TCAAAGATGG ACGCCTTGCC GCTGTCGGAGGAGTACCGCC AGCATCAGGC GGAGAAGGAC AAGTAG |
| Small myristoylated protein 1 Q5SDH5] | |
|---|---|
| Metabolite Information | |
| Molecular Function | molecular function unknown |
| Biochemical Pathway | biological process unknown |
| Regulatory Pathway | |
| KEGG Pathways | |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | J domain containing protein 1 isoform a [Homo sapiens] | 31 | 2.6 | 28 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| HP0182 lysyl-tRNA synthetase (lysS) | Helicobacter pylori | 40% | 0.65 | 26.9 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| Acylation | N-myristoylation site | 2-7; | PS00008 | |
| Glycosylation | N-glycosylation site | 9-12; 52-55; | PS00001 | |
| Phosphorylation | Casein kinase II phosphorylation site | 55-58; 64-67; 77-80; 111-114; | PS00006 | |
| Small myristoylated protein 1 [Q5SDH5] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 2fe0A | |
| Percent Identity | 100% | |
| Target Region | 1-131 | |
| Template Region | 1-131 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
|
|
|
| Modeled Protein | Template Structure |
|
|
+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/3172505/Q5SDH5.pdb 2.0 131 = residues | | = | *| Ramachandran plot: 86.2% core 11.2% allow 1.7% gener 0.9% = disall | | = | *| All Ramachandrans: 5 labelled residues (out of 129) = | | Chi1-chi2 plots: 0 labelled residues (out of 82) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | +| Residue properties: Max.deviation: 4.0 Bad contacts: = 2 | +| Bond len/angle: 3.8 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.02 Covalent: -0.07 Overall: = -0.02 | | = | | M/c bond lengths: 99.1% within limits 0.9% highlighted = | | M/c bond angles: 97.0% within limits 3.0% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |