| Mitochondrial RNA binding protein 2 [Q4QHR3] | |
|---|---|
| Systematic Name | LmjF.09.1120 [Leishmania major] |
| Gene Name | LMJF_09_1120 |
| Molecular Weight | 26791 Da |
| Protein Sequence Size | 242 |
| Function | |
| Charge | 11.5 |
| Isoelectric Point | 9.9095 pH |
| Description | Mitochondrial RNA binding protein 2 (Mrp2, gbp25). |
| Subcellular Location | Mitochondrion[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4QHR3|Q4QHR3_LEIMA Mitochondrial RNA binding protein 2 (Mrp2, gbp25) - Leishmania major. LRRVPTLCALRQRAGVTAMAVVGGLSASTGSFACQASPLQQVRWASSDAVAPTSNNAQRN NSRNSSMQSQRGRRDAMPPAFDIVHWNDEDIAAGHLLRVVHRDGFIVLDYHRQRCATAEL REDGSRAANPNRAERVVTVTLPPVYVARFLGVLEGRMSKLEVQSRFTNASFSPNAAKGKH HYTLRCTSMKPTTGQIQTVDGADVHEETVEWTVEFDAAESLMLHRFLTQALHYNTGFSRK V |
| DNA Sequence | >LmjF09.1120 |||mitochondrial RNA binding protein 2|Leishmania major|chr 9|||Manual ATGCTTCGTC GTGTCCCCAC TCTGTGTGCG CTGCGTCAAC GCGCGGGCGT CACGGCCATGGCCGTCGTCG GCGGTCTCTC TGCCAGCACG GGCTCGTTTG CCTGCCAGGC ATCCCCTCTGCAGCAGGTAC GCTGGGCCTC CTCGGATGCA GTGGCACCCA CAAGCAACAA CGCGCAGCGCAACAACAGTA GAAATAGCAG TATGCAGAGT CAGCGAGGGC GGCGCGACGC GATGCCGCCGGCCTTCGACA TTGTGCACTG GAACGACGAG GACATCGCTG CAGGCCACCT GCTGCGCGTGGTGCACCGCG ACGGCTTCAT CGTTCTGGAC TACCACCGGC AGCGTTGTGC CACCGCCGAACTTCGTGAGG ATGGCAGTCG GGCGGCGAAC CCGAACCGCG CCGAGAGGGT GGTGACAGTGACTCTGCCGC CCGTGTACGT TGCGCGCTTC CTCGGGGTGC TGGAGGGGCG CATGAGCAAGCTGGAGGTGC AGTCGCGCTT CACGAACGCC TCGTTTTCGC CGAATGCAGC GAAGGGAAAGCACCACTACA CTCTGCGCTG CACGTCCATG AAGCCGACCA CTGGCCAGAT CCAGACGGTGGACGGCGCCG ACGTGCATGA GGAGACGGTG GAGTGGACAG TGGAGTTCGA CGCGGCAGAGTCGCTGATGC TGCACCGCTT CCTCACGCAG GCCCTTCATT ATAACACTGG TTTTTCCCGCAAAGTGTAG |
| Mitochondrial RNA binding protein 2 Q4QHR3] | |
|---|---|
| Metabolite Information | |
| Molecular Function | RNA binding |
| Biochemical Pathway | RNA editing |
| Regulatory Pathway | |
| KEGG Pathways | |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| gmk guanylate kinase | Mycobacterium tuberculosis H37Rv | 24% | 5.3 | 25.4 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00013 | Prokaryotic membrane lipoprotein lipid attachment site profile | 25-35; | PS51257 | |
| Acylation | N-myristoylation site | 24-29; 25-30; 31-36; 125-130; 152-157; 195-200; | PS00008 | |
| Amidation | Amidation site | 72-75; | PS00009 | |
| Glycosylation | N-glycosylation site | 61-64; 65-68; 169-172; | PS00001 | |
| Phosphorylation | Casein kinase II phosphorylation site | 159-162; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 70-72; 184-186; 189-191; 239-241; | PS00005 | |
| Mitochondrial RNA binding protein 2 [Q4QHR3] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 2gjeA | |
| Percent Identity | 63% | |
| Target Region | 72-242 | |
| Template Region | 65-145 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
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| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/486970/Q4QHR3.pdb 2.0 171 = residues | | = | +| Ramachandran plot: 93.4% core 5.9% allow 0.7% gener 0.0% = disall | | = | +| All Ramachandrans: 2 labelled residues (out of 169) = | +| Chi1-chi2 plots: 2 labelled residues (out of 98) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 2.5 Bad contacts: = 3 | *| Bond len/angle: 5.1 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.07 Covalent: -0.20 Overall: = -0.03 | | = | | M/c bond lengths: 98.5% within limits 1.5% highlighted = | | M/c bond angles: 92.6% within limits 7.4% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |