| Hypothetical protein [Q4QH88] | |
|---|---|
| Systematic Name | LmjF.10.1240 [Leishmania major] |
| Gene Name | LMJF_10_1240 |
| Molecular Weight | 35838 Da |
| Protein Sequence Size | 321 |
| Function | |
| Charge | -1 |
| Isoelectric Point | 6.3 pH |
| Description | Hypothetical protein. |
| Subcellular Location | N.A.[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4QH88|Q4QH88_LEIMA Hypothetical protein - Leishmania major. GLLNTKPCSLIPAKEAFEREKKIYDKAILSFDGVNGYDVYNCSVPFTYDGKTYIFGRVEK KDEWVHSNSILFEKVGENRYRRHPTSITYNLEDPFVVKIHGEMVLGGTHVTKNGGKVSDY RCEFYHGTPLNLKYFSSGPSKMKDIRLVELADGKIGVFTHFRTEGSCLTGFATIDKIEDL TVEVINSAKLINHRPFGDAWGGPSQVYLLSSGLLGCISHHGYLLDQKDDIQLRIYACTSF VFDPATYDVYNFKIIGTKGCFPPCEPKLPHLADCAFVSGIEMRDDGKCNLYSGIGDVAEG CIVIDYPFEGYGKIVSDVAF |
| DNA Sequence | >LmjF10.1240 |||hypothetical protein, conserved|Leishmania major|chr 10|||Manual ATGGGGCTTC TCAACACAAA GCCGTGCTCA TTAATTCCCG CCAAGGAGGC ATTTGAGCGCGAAAAGAAAA TCTATGACAA GGCGATCTTG TCGTTCGATG GAGTCAATGG GTACGACGTGTACAACTGCT CTGTCCCCTT CACCTACGAT GGCAAAACAT ACATCTTTGG CCGCGTGGAGAAGAAGGATG AGTGGGTTCA CTCAAACAGC ATACTATTCG AAAAAGTAGG CGAGAACCGATACCGGCGAC ACCCGACGTC CATCACGTAC AACTTGGAGG ATCCGTTTGT GGTGAAGATTCACGGTGAAA TGGTCCTTGG CGGCACCCAC GTTACGAAGA ACGGCGGCAA GGTGTCCGATTACCGTTGCG AATTCTACCA CGGGACACCC CTCAATCTCA AGTACTTCTC TTCTGGCCCTTCAAAGATGA AAGACATTCG TCTGGTTGAG CTGGCTGACG GCAAGATCGG CGTCTTCACACATTTTCGCA CAGAGGGCTC ATGCTTGACC GGCTTTGCTA CTATCGATAA GATAGAGGACCTTACTGTGG AGGTGATCAA CTCAGCAAAA CTGATCAACC ACCGTCCATT TGGAGACGCCTGGGGAGGCC CGAGTCAGGT GTACTTGCTC TCATCCGGCT TACTGGGATG CATTTCGCATCACGGCTACC TCCTCGATCA GAAGGATGAC ATTCAGCTCC GCATTTACGC TTGCACATCTTTTGTGTTCG ACCCTGCGAC CTACGACGTG TACAACTTCA AAATCATCGG AACCAAAGGGTGCTTCCCGC CGTGCGAACC AAAACTACCG CACTTGGCCG ATTGCGCCTT CGTGTCTGGTATCGAAATGC GCGATGATGG CAAGTGCAAC CTGTACAGCG GCATTGGGGA CGTTGCCGAGGGGTGCATAG TTATCGACTA CCCTTTTGAA GGATACGGCA AGATCGTAAG CGATGTCGCCTTCTGA |
| Hypothetical protein Q4QH88] | |
|---|---|
| Metabolite Information | |
| Molecular Function | |
| Biochemical Pathway | |
| Regulatory Pathway | |
| KEGG Pathways | |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | dehydrogenase/reductase (SDR family) member 1 [Homo sapiens] | 33 | 1.3 | 31 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YHR072w lanosterol synthase | Saccharomyces cerevisiae | 24% | 0.022 | 33.9 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| Acylation | N-myristoylation site | 2-7; 108-113; 115-120; 128-133; 166-171; 213-218; 257-262; | PS00008 | |
| Glycosylation | N-glycosylation site | 42-45; | PS00001 | |
| Phosphorylation | Casein kinase II phosphorylation site | 279-282; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 188-190; | PS00005 | |
| Phosphorylation | Tyrosine kinase phosphorylation site | 75-81; | PS00007 | |
| Hypothetical protein [Q4QH88] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 2b4wA | |
| Percent Identity | 49% | |
| Target Region | 12-321 | |
| Template Region | 2-292 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/1821554/Q4QH88.pdb 2.0 310 = residues | | = | *| Ramachandran plot: 91.6% core 6.8% allow 1.1% gener 0.4% = disall | | = | *| All Ramachandrans: 12 labelled residues (out of 308) = | *| Chi1-chi2 plots: 6 labelled residues (out of 185) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 4.0 Bad contacts: = 4 | *| Bond len/angle: 5.9 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: -0.10 Covalent: -0.19 Overall: = -0.13 | | = | | M/c bond lengths: 99.0% within limits 1.0% highlighted = | | M/c bond angles: 92.9% within limits 7.1% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |