| 40S ribosomal protein S15a, putative [Q4QGW3] | |
|---|---|
| Systematic Name | LmjF.11.1190 [Leishmania major] |
| Gene Name | LMJF_11_1190 |
| Molecular Weight | 14696 Da |
| Protein Sequence Size | 130 |
| Function | |
| Charge | 10.5 |
| Isoelectric Point | 10.4656 pH |
| Description | 40S ribosomal protein S15a, putative. |
| Subcellular Location | cytosolic small ribosomal subunit (sensu Eukaryota); intracellular; ribosome[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4QGW3|Q4QGW3_LEIMA 40S ribosomal protein S15a, putative - Leishmania major. TMMSVLANALRTIASAERRGKRQVLIRPSSKVVVKFLQVMQKHGYIGEFEIIDDHRAGKI VVNLNGRLNKCGAICPRFDCATTDYEKWMKNILPSRQFGFVVLTTSLGIMDHEEARSRNT GGKVLGFFY |
| DNA Sequence | >LmjF11.1190 |||40S ribosomal protein S15a, putative|Leishmania major|chr 11|||Manual ATGACGATGA TGAGCGTTCT CGCGAACGCG CTTCGCACCA TTGCGAGCGC GGAGCGCCGTGGCAAGCGCC AGGTGCTCAT CCGCCCCTCC TCCAAGGTGG TGGTGAAGTT CCTGCAGGTGATGCAGAAGC ACGGCTACAT TGGCGAGTTC GAGATCATCG ATGACCATCG CGCTGGCAAGATCGTTGTGA ACCTGAACGG CCGCCTGAAC AAGTGCGGTG CCATCTGCCC GCGCTTCGACTGCGCCACCA CCGACTACGA GAAGTGGATG AAGAACATCC TGCCCTCCCG TCAGTTCGGCTTCGTGGTGC TGACGACCTC GCTCGGCATC ATGGACCACG AGGAGGCCCG CTCCCGCAACACCGGTGGTA AGGTGCTCGG CTTCTTCTAC TAA |
| 40S ribosomal protein S15a, putative Q4QGW3] | |
|---|---|
| Metabolite Information | |
| Molecular Function | RNA binding; structural constituent of ribosome |
| Biochemical Pathway | protein biosynthesis |
| Regulatory Pathway | |
| KEGG Pathways | K02957 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | ribosomal protein S15a [Homo sapiens] | 75 | 4e-54 | 206 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| rpsH ribosomal protein S8 (BS8) | Bacillus subtilis | 25% | 0.0000006 | 47 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00052 | Ribosomal protein S8 signature | 100-117; | PS00053 | |
| Amidation | Amidation site | 20-23; | PS00009 | |
| Phosphorylation | Casein kinase II phosphorylation site | 84-87; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 30-32; | PS00005 | |
| 40S ribosomal protein S15a, putative [Q4QGW3] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1s1hH | |
| Percent Identity | 72% | |
| Target Region | 1-130 | |
| Template Region | 3-127 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
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| Residue | Active Site Number | Functional Part |
| Co-Factor | |
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| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/4077320/Q4QGW3.pdb 2.0 130 = residues | | = | *| Ramachandran plot: 88.6% core 7.9% allow 2.6% gener 0.9% = disall | | = | *| All Ramachandrans: 4 labelled residues (out of 128) = | +| Chi1-chi2 plots: 1 labelled residues (out of 80) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 4.0 Bad contacts: = 4 | *| Bond len/angle: 6.7 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.10 Covalent: -0.25 Overall: = -0.03 | | = | | M/c bond lengths: 99.5% within limits 0.5% highlighted = | | M/c bond angles: 92.5% within limits 7.5% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |