| Ribonuclease mar1 [Q4QGT7] | |
|---|---|
| Systematic Name | LmjF.12.0060 [Leishmania major] |
| Gene Name | 01-03-2022 00:00:00 |
| Molecular Weight | 21586 Da |
| Protein Sequence Size | 192 |
| Function | |
| Charge | 3.5 |
| Isoelectric Point | 7.8941 pH |
| Description | Ribonuclease mar1. |
| Subcellular Location | N.A.[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4QGT7|Q4QGT7_LEIMA Ribonuclease mar1 - Leishmania major. SRLMPHYSKGKTAFLCVDLQEAFSKRIENFANCVFVANRLARLHELVPENTKYIVTEHYP KGLGRIVPGITLPQTAHLIEKTRFSCIVPQVEELLEDVDNAVVFGIEGHACILQTVADLL DMNKRVFLPKDGLGSQKKTDFKAAMKLMGSWSPNCEITTSESILLQMTKDAMDPNFKKIS KLLKEEPPIPL |
| DNA Sequence | >LmjF12.0060 |MAR1||ribonuclease mar1|Leishmania major|chr 12|||Manual ATGTCTCGCT TGATGCCGCA TTACTCCAAG GGCAAGACGG CCTTCCTGTG CGTAGATCTCCAAGAGGCGT TTAGTAAGCG CATCGAGAAT TTCGCCAATT GCGTGTTCGT TGCTAACCGGCTGGCACGTC TGCATGAGTT GGTGCCCGAG AACACCAAGT ACATTGTCAC AGAGCATTATCCGAAGGGTC TAGGCCGCAT CGTGCCGGGG ATTACCTTGC CCCAAACCGC CCACCTGATCGAGAAGACGC GCTTCTCGTG TATCGTGCCA CAGGTTGAGG AACTGCTGGA GGACGTGGACAATGCTGTCG TCTTTGGTAT TGAGGGGCAC GCGTGCATCC TGCAGACAGT GGCTGACCTCCTGGACATGA ACAAGCGTGT GTTCCTTCCA AAGGACGGCC TGGGCAGCCA AAAGAAGACAGACTTTAAGG CAGCGATGAA GTTGATGGGT TCGTGGAGCC CCAACTGCGA GATCACCACCTCTGAGTCAA TTCTGCTTCA GATGACAAAG GATGCCATGG ACCCCAACTT CAAGAAGATTTCAAAGCTGC TGAAGGAGGA GCCTCCGATC CCGCTCTGA |
| Ribonuclease mar1 Q4QGT7] | |
|---|---|
| Metabolite Information | |
| Molecular Function | catalytic activity |
| Biochemical Pathway | metabolism |
| Regulatory Pathway | |
| KEGG Pathways | |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | isochorismatase domain containing 2 [Homo sapiens] | 32 | 1e-16 | 83 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YDR037w lysyl-tRNA synthetase, cytosolic | Saccharomyces cerevisiae | 28% | 1.7 | 26.6 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| Phosphorylation | cAMP- and cGMP-dependent protein kinase phosphorylation site | 178-181; | PS00004 | |
| Phosphorylation | Casein kinase II phosphorylation site | 116-119; 159-162; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 25-27; 136-138; | PS00005 | |
| Ribonuclease mar1 [Q4QGT7] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1xn4A | |
| Percent Identity | 100% | |
| Target Region | 1-192 | |
| Template Region | 2-191 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| ASP | 19 | Sidechain |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/1310426/Q4QGT7.pdb 2.0 192 = residues | | = | +| Ramachandran plot: 92.9% core 6.5% allow 0.6% gener 0.0% = disall | | = | *| All Ramachandrans: 6 labelled residues (out of 190) = | | Chi1-chi2 plots: 0 labelled residues (out of 120) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 2.3 Bad contacts: = 4 | *| Bond len/angle: 7.1 Morris et al class: 1 = 1 2 | +| 2 cis-peptides = | | G-factors Dihedrals: 0.10 Covalent: -0.07 Overall: = 0.03 | | = | | M/c bond lengths: 99.5% within limits 0.5% highlighted = | | M/c bond angles: 95.2% within limits 4.8% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |