LeishBase: Leishmania Structural Database
header
Home List of Proteins How to Visualize Structures Download Contact Us
Protein tyrosine phosphatase-like protein [Q4QEZ7]
Systematic NameLmjF.16.0230 [Leishmania major]
Gene NameLMJF_16_0230
Molecular Weight19376 Da
Protein Sequence Size175
Function
Charge6.5
Isoelectric Point8.3 pH
DescriptionProtein tyrosine phosphatase-like protein.
Subcellular LocationN.A.[Predict]
E. C. Number N.A.
Sequence>tr|Q4QEZ7|Q4QEZ7_LEIMA Protein tyrosine phosphatase-like protein - Leishmania major.
EVNATLIDCCDPQKPSRVLFHFLILDAPSPSNLPTYIKELQHRGVRHLVRVCGPTYDATL
VKSRGIDVHSWPFDDGAPPTRAVLDSWLKLLDTELARQQEDPSVPPPTIGVHCVAGLGRA
PILVALALVEYGNVSALDAIALIREKRKGAINQTQMHWITKYKRRHQGAGCVIM
DNA Sequence>LmjF16.0230 |||protein tyrosine phosphatase-like protein|Leishmania major|chr 16|||Manual
ATGGAGGTGA ACGCTACGCT GATCGACTGC TGCGACCCGC AGAAGCCGTC GAGGGTGCTCTTTCACTTTC TCATCCTCGA CGCGCCGTCC CCCAGCAACC TCCCGACATA CATCAAGGAGCTGCAGCACC GCGGCGTGCG GCACTTGGTG CGGGTATGCG GCCCGACCTA CGACGCCACCCTTGTCAAGA GCAGGGGCAT TGATGTCCAC AGCTGGCCAT TCGACGACGG CGCGCCTCCGACGCGTGCGG TGCTTGACAG CTGGCTGAAG CTGCTCGACA CGGAGCTTGC GCGTCAGCAGGAGGATCCCT CCGTGCCTCC GCCAACCATC GGCGTGCACT GCGTGGCGGG CCTGGGCCGCGCACCAATCT TGGTGGCGCT GGCGCTGGTG GAGTACGGCA ACGTATCTGC ACTAGACGCTATCGCACTGA TCCGCGAGAA GCGCAAGGGT GCAATTAATC AGACACAGAT GCACTGGATCACCAAGTACA AGCGTCGCCA CCAGGGTGCG GGCTGCGTGA TCATGTAG
Protein tyrosine phosphatase-like protein Q4QEZ7]
Metabolite Information
Molecular Functionphosphoprotein phosphatase activity; protein tyrosine phosphatase activity; protein tyrosine/serine/threonine phosphatase activity
Biochemical Pathwayprotein amino acid dephosphorylation
Regulatory Pathway
KEGG PathwaysK01104
Orthologs
Homologs GI Percent Identity Evalue Score
Homo sapiensprotein tyrosine phosphatase type IVA, member 1 [Homo sapiens]483e-32134
DEG Information
DEG Protein DEG Organism Percent Identity Evalue Bit Score
YFR028c dual specificity phosphataseSaccharomyces cerevisiae26%0.00000246.2
Post Translational Modification
PTM Type PTM Sub Type Score Modification Site Prosite ID
PDOC00323Tyrosine specific protein phosphatases signature and profiles15.31286-159PS50056
AcylationN-myristoylation site77-82; 133-138; PS00008
GlycosylationN-glycosylation site4-7; 134-137; 153-156; PS00001
PhosphorylationCasein kinase II phosphorylation site6-9; 136-139; PS00006
PrenylationPrenyl group binding site (CAAX box)172-175; PS00294
Protein tyrosine phosphatase-like protein [Q4QEZ7]
Model Information
Template PDB ID1zckC
Percent Identity48%
Target Region13-170
Template Region9-151
Domain Information
Domains Start End
Active Site Information
Residue Active Site Number Functional Part
ASP64Sidechain
CYS102Sidechain
ARG108Sidechain
Co-Factor
Metal Description
Ligands
CAS number Name Mol. Weight Mol. Formula Smile Notation PDB Reference
71-50-1ACETIC ACID60.052 C2 H4 O2 O=C(O)C1zck
Mutational Information
Residue Feature Description
Modeled Protein Template Structure
+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/789786/Q4QEZ7.pdb 2.0 158 = residues | | = | +| Ramachandran plot: 91.7% core 7.5% allow 0.8% gener 0.0% = disall | | = | *| All Ramachandrans: 5 labelled residues (out of 156) = | +| Chi1-chi2 plots: 1 labelled residues (out of 91) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 3.8 Bad contacts: = 3 | *| Bond len/angle: 5.9 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.04 Covalent: -0.17 Overall: = -0.04 | | = | | M/c bond lengths: 99.1% within limits 0.9% highlighted = | | M/c bond angles: 93.5% within limits 6.5% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further.
Overlapped Structure Procheck Summary
LeishBase: Leishmania Structural Database