| 60S ribosomal protein L39, putative [Q4QEQ0] | |
|---|---|
| Systematic Name | LmjF.16.1170 [Leishmania major] |
| Gene Name | LMJF_16_1170 |
| Molecular Weight | 6486 Da |
| Protein Sequence Size | 51 |
| Function | |
| Charge | 17.5 |
| Isoelectric Point | 12.345 pH |
| Description | 60S ribosomal protein L39, putative. |
| Subcellular Location | intracellular; ribosome[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4QEQ0|Q4QEQ0_LEIMA 60S ribosomal protein L39, putative - Leishmania major. GRFKPLAVKKKYAKKMNQNKPVPYWIRLRTGNRIKWNEKRRHWRRTKLNY |
| DNA Sequence | >LmjF16.1170 |||60S ribosomal protein L39, putative|Leishmania major|chr 16|||Manual ATGGGCCGCT TCAAGCCCCT TGCTGTGAAG AAGAAGTACG CGAAGAAGAT GAACCAGAACAAGCCGGTGC CGTACTGGAT TCGCCTTCGC ACGGGCAACC GCATCAAGTG GAACGAGAAGCGCCGCCACT GGCGCCGCAC GAAGCTGAAC TACTAA |
| 60S ribosomal protein L39, putative Q4QEQ0] | |
|---|---|
| Metabolite Information | |
| Molecular Function | structural constituent of ribosome |
| Biochemical Pathway | protein biosynthesis |
| Regulatory Pathway | |
| KEGG Pathways | |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | ribosomal protein L39 [Homo sapiens] | 70 | 0.00000007 | 52 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| Rv2188c hypothetical protein | Mycobacterium tuberculosis H37Rv | 52% | 0.19 | 27.7 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00050 | Ribosomal protein L39e signature | 30-46; | PS00051 | |
| 60S ribosomal protein L39, putative [Q4QEQ0] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 2otl2 | |
| Percent Identity | 54% | |
| Target Region | 1-51 | |
| Template Region | 1-46 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/1196688/Q4QEQ0.pdb 2.0 51 = residues | | = | | Ramachandran plot: 97.7% core 2.3% allow 0.0% gener 0.0% = disall | | = | | All Ramachandrans: 0 labelled residues (out of 49) = | | Chi1-chi2 plots: 0 labelled residues (out of 40) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | | Residue properties: Max.deviation: 2.0 Bad contacts: = 1 | +| Bond len/angle: 4.5 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.17 Covalent: -0.14 Overall: = 0.06 | | = | | M/c bond lengths: 98.4% within limits 1.6% highlighted = | | M/c bond angles: 94.3% within limits 5.7% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |