| Microtubule-associated protein 1A/1B, light chain 3, putative [Q4QD46] | |
|---|---|
| Systematic Name | LmjF.19.1630 [Leishmania major] |
| Gene Name | ATG8 |
| Molecular Weight | 13944 Da |
| Protein Sequence Size | 125 |
| Function | |
| Charge | 1 |
| Isoelectric Point | 7.5085 pH |
| Description | Microtubule-associated protein 1A/1B, light chain 3, putative. |
| Subcellular Location | cytoplasm[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4QD46|Q4QD46_LEIMA Microtubule-associated protein 1A/1B, light chain 3, putative - Leishmania major. SSRVAGSYKKAHTLEARLRDAEKVRERAPDRILVICEKAENSPVPDLDKSKFLVPPDATV GGFLVSIRRRITMEAEKALFLFVGDSVPANSTLMSDLFNRYKDEDGFLYVTYSGENTYGG QGLH |
| DNA Sequence | >LmjF19.1630 |||microtubule-associated protein 1A/1B, light chain 3, putative|Leishmania major|chr 19|||Manual ATGTCTTCCA GAGTAGCTGG GTCGTACAAG AAGGCGCACA CGCTGGAGGC ACGCCTGCGCGATGCGGAAA AGGTCCGTGA GCGTGCTCCC GATCGCATTC TCGTGATTTG CGAGAAGGCAGAAAACTCGC CCGTTCCTGA TCTGGACAAG AGCAAGTTCC TGGTACCGCC GGACGCGACCGTTGGCGGCT TTCTTGTGAG CATCCGTCGT CGCATCACCA TGGAGGCCGA GAAGGCACTCTTTCTCTTTG TGGGTGACAG CGTTCCGGCA AACAGCACTC TCATGAGCGA CCTCTTCAATCGCTATAAGG ATGAGGACGG GTTCTTGTAC GTGACGTACT CTGGCGAGAA CACGTACGGCGGGCAGGGGC TGCACTAG |
| Microtubule-associated protein 1A/1B, light chain 3, putative Q4QD46] | |
|---|---|
| Metabolite Information | |
| Molecular Function | microtubule binding |
| Biochemical Pathway | autophagy |
| Regulatory Pathway | |
| KEGG Pathways | K08341 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | GABA(A) receptor-associated protein-like 2 [Homo sapiens] | 51 | 8e-29 | 121 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| smc chromosome segregation SMC protein homolg | Bacillus subtilis | 35% | 2.9 | 24.6 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| Glycosylation | N-glycosylation site | 91-94; | PS00001 | |
| Phosphorylation | cAMP- and cGMP-dependent protein kinase phosphorylation site | 70-73; | PS00004 | |
| Phosphorylation | Protein kinase C phosphorylation site | 2-4; 8-10; 67-69; | PS00005 | |
| Phosphorylation | Tyrosine kinase phosphorylation site | 103-110; | PS00007 | |
| Microtubule-associated protein 1A/1B, light chain 3, putative [Q4QD46] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1eo6B | |
| Percent Identity | 51% | |
| Target Region | 1-125 | |
| Template Region | 1-117 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
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| Residue | Active Site Number | Functional Part |
| Co-Factor | |
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| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/877320/Q4QD46.pdb 2.0 125 = residues | | = | | Ramachandran plot: 94.4% core 5.6% allow 0.0% gener 0.0% = disall | | = | +| All Ramachandrans: 3 labelled residues (out of 123) = | | Chi1-chi2 plots: 0 labelled residues (out of 73) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | | Residue properties: Max.deviation: 2.0 Bad contacts: = 3 | +| Bond len/angle: 4.4 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.13 Covalent: -0.12 Overall: = 0.03 | | = | | M/c bond lengths: 99.3% within limits 0.7% highlighted = | | M/c bond angles: 93.8% within limits 6.2% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |