| Histone H2A, putative [Q4QCA4] | |
|---|---|
| Systematic Name | LmjF.21.0915 [Leishmania major] |
| Gene Name | LMJF_21_0915 |
| Molecular Weight | 13822 Da |
| Protein Sequence Size | 132 |
| Function | |
| Charge | 23 |
| Isoelectric Point | 11.9 pH |
| Description | Histone H2A, putative. |
| Subcellular Location | nucleosome; nucleus[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4QCA4|Q4QCA4_LEIMA Histone H2A, putative - Leishmania major. ATPRSAKKAARKSSTKSAKAGLIFPVGRVGGMMRRGQYARRIGSSGAVYLAAVLEYLTAE LLELSVKAAAQSGKKRCRLSPRTVMLAARHDDDISSLLRKVTLSHSGVVPSASKAVAKKK GGKKGKATPSA |
| DNA Sequence | >LmjF21.0915 |||histone h2a|Leishmania major|chr 21|||Manual ATGGCTACTC CTCGCAGCGC CAAGAAGGCC GCCCGCAAGA GCAGCACCAA GTCCGCGAAGGCTGGTCTGA TCTTCCCGGT GGGCCGCGTC GGCGGGATGA TGCGTCGCGG CCAGTACGCTCGCCGCATCG GCTCCTCTGG CGCCGTGTAC CTGGCCGCCG TGCTGGAGTA CCTGACGGCGGAGCTGCTGG AGCTGTCCGT GAAGGCGGCC GCGCAGAGCG GGAAGAAGCG GTGCCGCCTGAGCCCGCGCA CCGTGATGCT GGCCGCGCGC CACGACGACG ACATCAGCTC GCTTCTGAGGAAGGTGACCT TGTCTCACAG CGGCGTTGTG CCGAGCGCCA GCAAGGCGGT GGCAAAGAAGAAGGGCGGCA AGAAGGGCAA GGCGACACCG AGCGCATAA |
| Histone H2A, putative Q4QCA4] | |
|---|---|
| Metabolite Information | |
| Molecular Function | DNA binding |
| Biochemical Pathway | chromosome organization and biogenesis (sensu Eukaryota); nucleosome assembly |
| Regulatory Pathway | |
| KEGG Pathways | |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | H2A histone family, member J isoform 2 [Homo sapiens] | 46 | 0.0000000000002 | 72 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| yqjK Hypothetical protein yqjK | Escherichia coli MG1655 | 36% | 9.6 | 23.1 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00045 | Histone H2A signature | 21-27; | PS00046 | |
| Acylation | N-myristoylation site | 44-49; 108-113; 122-127; | PS00008 | |
| Amidation | Amidation site | 73-76; 122-125; | PS00009 | |
| Phosphorylation | cAMP- and cGMP-dependent protein kinase phosphorylation site | 12-15; 100-103; | PS00004 | |
| Phosphorylation | Protein kinase C phosphorylation site | 3-5; 6-8; 15-17; 18-20; 66-68; 73-75; 81-83; | PS00005 | |
| Histone H2A, putative [Q4QCA4] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 2hioA | |
| Percent Identity | 46% | |
| Target Region | 15-132 | |
| Template Region | 15-101 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/442624/Q4QCA4.pdb 2.0 118 = residues | | = | | Ramachandran plot: 97.0% core 3.0% allow 0.0% gener 0.0% = disall | | = | +| All Ramachandrans: 1 labelled residues (out of 116) = | | Chi1-chi2 plots: 0 labelled residues (out of 55) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 2.5 Bad contacts: = 1 | *| Bond len/angle: 5.4 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.18 Covalent: -0.13 Overall: = 0.06 | | = | | M/c bond lengths: 99.0% within limits 1.0% highlighted = | | M/c bond angles: 95.6% within limits 4.4% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |