| 40S ribosomal protein S23, putative [Q4QC89] | |
|---|---|
| Systematic Name | LmjF.21.1060 [Leishmania major] |
| Gene Name | LMJF_21_1060 |
| Molecular Weight | 15936 Da |
| Protein Sequence Size | 143 |
| Function | |
| Charge | 22 |
| Isoelectric Point | 11.349 pH |
| Description | 40S ribosomal protein S23, putative. |
| Subcellular Location | cytosolic small ribosomal subunit (sensu Eukaryota); intracellular; ribosome; small ribosomal subunit[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4QC89|Q4QC89_LEIMA 40S ribosomal protein S23, putative - Leishmania major. TKTNGQNAARKLVRLRCRNRWADKGWKRAHTFSARKANPFGGSSHAKGIVLEKIGVGAKQ PNSAIRKCVRVQLIKNDKKIIAFVPNDGCLHFIEENDEVLVSGFGRSGHAVGDIPGVRFK IVKVSNVGLYALYRQKKEKPRN |
| DNA Sequence | >LmjF21.1060 |||40S ribosomal protein S23, putative|Leishmania major|chr 21|||Manual ATGACGAAGA CCAACGGTCA GAACGCAGCT CGTAAGCTGG TGCGCCTGCG CTGCCGCAACCGCTGGGCCG ACAAGGGCTG GAAGCGCGCG CACACCTTCT CGGCCAGGAA GGCGAACCCCTTTGGTGGGT CGTCGCACGC CAAGGGTATC GTGCTGGAGA AGATCGGCGT CGGCGCCAAGCAGCCTAACT CCGCCATTCG TAAGTGTGTG CGTGTGCAGC TGATCAAGAA CGACAAGAAGATCATCGCGT TCGTGCCGAA CGATGGCTGC CTTCACTTCA TCGAGGAGAA CGACGAGGTGCTGGTGTCTG GTTTCGGCCG TTCTGGCCAC GCGGTCGGTG ATATTCCCGG CGTCCGCTTCAAGATCGTGA AGGTGTCGAA CGTCGGCCTG TACGCCCTGT ACCGGCAGAA GAAGGAGAAGCCGCGTAACT AG |
| 40S ribosomal protein S23, putative Q4QC89] | |
|---|---|
| Metabolite Information | |
| Molecular Function | RNA binding; nucleic acid binding; structural constituent of ribosome |
| Biochemical Pathway | protein biosynthesis |
| Regulatory Pathway | |
| KEGG Pathways | K02973 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | ribosomal protein S23 [Homo sapiens] | 74 | 4e-56 | 213 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| rpsL 30S ribosomal protein S12 | Mycobacterium tuberculosis H37Rv | 36% | 0.000000006 | 53.9 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00054 | Ribosomal protein S12 signature | 60-67; | PS00055 | |
| Acylation | N-myristoylation site | 6-11; 43-48; | PS00008 | |
| Phosphorylation | Protein kinase C phosphorylation site | 34-36; | PS00005 | |
| 40S ribosomal protein S23, putative [Q4QC89] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1s1hL | |
| Percent Identity | 71% | |
| Target Region | 1-14 | |
| Template Region | 28-118 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
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| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/484890/Q4QC89.pdb 2.0 143 = residues | | = | *| Ramachandran plot: 86.1% core 9.8% allow 2.5% gener 1.6% = disall | | = | *| All Ramachandrans: 6 labelled residues (out of 141) = | +| Chi1-chi2 plots: 1 labelled residues (out of 86) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | +| Residue properties: Max.deviation: 4.0 Bad contacts: = 5 | +| Bond len/angle: 4.2 Morris et al class: 1 = 1 3 | | = | | G-factors Dihedrals: -0.06 Covalent: -0.31 Overall: = -0.15 | | = | | M/c bond lengths: 99.1% within limits 0.9% highlighted = | | M/c bond angles: 90.6% within limits 9.4% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |