| Hypothetical protein [Q4QAY0] | |
|---|---|
| Systematic Name | LmjF.23.1580 [Leishmania major] |
| Gene Name | LMJF_23_1580 |
| Molecular Weight | 16887 Da |
| Protein Sequence Size | 155 |
| Function | |
| Charge | -5 |
| Isoelectric Point | 4.9268 pH |
| Description | Hypothetical protein. |
| Subcellular Location | N.A.[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4QAY0|Q4QAY0_LEIMA Hypothetical protein - Leishmania major STPKTIYIAGPAVFHPDNGEAYYNHVRALLKEKGVVPLIPVDNIATGALSIRNKNIDMIR ACDAVIADLSPFRSKEPDCGTAFELGYAAALGKLLLTFTTDTRPMVEKYGGEMAEGLSVE NFGLPFNLMLHDGTDVFDSFEAAFAHFVDHHLTP |
| DNA Sequence | >LmjF23.1580 |||hypothetical protein, conserved|Leishmania major|chr 23|||Manual ATGTCGACAC CAAAGACAAT CTACATTGCC GGCCCCGCTG TGTTCCACCC CGACAACGGCGAGGCGTACT ACAACCATGT ACGTGCACTG CTGAAGGAGA AGGGAGTCGT GCCGCTCATTCCAGTGGACA ACATCGCCAC CGGAGCCCTG AGCATCCGCA ACAAGAACAT CGATATGATCCGGGCGTGCG ATGCCGTCAT CGCCGACCTC TCCCCGTTCC GATCCAAGGA GCCCGACTGCGGAACCGCCT TCGAGCTCGG CTACGCGGCG GCGCTCGGAA AGCTGCTGCT GACTTTTACCACCGACACGC GGCCCATGGT GGAAAAGTAT GGTGGTGAGA TGGCGGAGGG CCTCTCCGTCGAGAACTTTG GACTGCCGTT CAACCTGATG CTGCACGATG GAACGGACGT GTTCGATTCCTTTGAGGCGG CCTTTGCCCA TTTCGTTGAC CATCACCTTA CCCCATGA |
| Hypothetical protein Q4QAY0] | |
|---|---|
| Metabolite Information | |
| Molecular Function | |
| Biochemical Pathway | |
| Regulatory Pathway | |
| KEGG Pathways | |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | ubiquitin specific protease 13 (isopeptidase T-3) [Homo sapiens] | 55 | 1.8 | 29 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YNR038w RNA helicase required for 60S ribosomal subunit assembly | Saccharomyces cerevisiae | 45% | 3.4 | 25 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| Acylation | N-myristoylation site | 111-116; 124-129; | PS00008 | |
| Phosphorylation | Casein kinase II phosphorylation site | 82-85; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 3-5; 51-53; | PS00005 | |
| Hypothetical protein [Q4QAY0] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 2f67B | |
| Percent Identity | 63% | |
| Target Region | 1-155 | |
| Template Region | 3-158 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| TYR | 8 | Sidechain |
| ASN | 56 | Sidechain |
| ASP | 79 | Sidechain |
| GLU | 85 | Sidechain |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| BENZO[CD]INDOL-2(1H)-ONE | 169.179 | C11 H7 N O | O=C3c2cccc1cccc(c12)N3 | 2f67 | |
| 8013-25-0 | GLYCEROL | 92.094 | C3 H8 O3 | OCC(O)CO | 2f67 |
| 14808-79-8 | SULFATE ION | 96.063 | O4 S | [O-]S([O-])(=O)=O | 2f67 |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/1088782/Q4QAY0.pdb 2.0 155 = residues | | = | +| Ramachandran plot: 92.4% core 6.8% allow 0.8% gener 0.0% = disall | | = | +| All Ramachandrans: 3 labelled residues (out of 153) = | | Chi1-chi2 plots: 0 labelled residues (out of 88) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 2.3 Bad contacts: = 0 | *| Bond len/angle: 5.1 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.18 Covalent: -0.06 Overall: = 0.08 | | = | | M/c bond lengths: 99.3% within limits 0.7% highlighted = | | M/c bond angles: 95.7% within limits 4.3% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |