| 60S ribosomal protein L17, putative [Q4QAX6] | |
|---|---|
| Systematic Name | LmjF.24.0040 [Leishmania major] |
| Gene Name | LMJF_24_0040 |
| Molecular Weight | 19083 Da |
| Protein Sequence Size | 166 |
| Function | |
| Charge | 29.5 |
| Isoelectric Point | 11.3196 pH |
| Description | 60S ribosomal protein L17, putative. |
| Subcellular Location | cytosolic large ribosomal subunit (sensu Eukaryota); intracellular; large ribosomal subunit; ribosome[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4QAX6|Q4QAX6_LEIMA 60S ribosomal protein L17, putative - Leishmania major THYSRKPQVSSKSAKAKVSDLRCHYKNTFETANVINGMPLRKAQQLYRQVLAKTRCIPFK RYNGKIGRTAQAKEWGQTKGRWPRKSVVAMMSLLKNAEANAIEKGLDPNQMVIKHVQVDQ AARMRRRTYRAHGRITPYMCSPCHVQLFMSEKKERVPAPKSAPKK |
| DNA Sequence | >LmjF24.0040 |||60S ribosomal protein L17, putative|Leishmania major|chr 24|||Manual ATGACGCACT ACTCCCGAAA GCCGCAGGTG TCGTCGAAGA GCGCCAAGGC GAAGGTTAGCGACCTCCGCT GCCACTACAA GAACACCTTC GAGACGGCGA ATGTGATCAA CGGCATGCCGCTTCGCAAGG CTCAGCAGCT GTACCGCCAG GTGCTCGCCA AGACCCGCTG CATCCCGTTCAAGCGCTACA ACGGCAAGAT CGGCCGCACC GCTCAGGCGA AGGAGTGGGG CCAGACCAAGGGCCGCTGGC CGCGCAAGTC CGTCGTGGCG ATGATGTCGC TGCTCAAGAA CGCCGAGGCCAACGCCATCG AGAAGGGTCT TGACCCCAAC CAGATGGTCA TCAAGCACGT CCAGGTGGACCAGGCTGCCC GCATGCGCCG CCGCACGTAC CGTGCCCACG GTCGCATCAC GCCGTACATGTGCAGCCCCT GCCACGTGCA GCTGTTCATG TCGGAGAAGA AGGAGCGGGT CCCGGCCCCGAAGAGCGCCC CCAAGAAGTG A |
| 60S ribosomal protein L17, putative Q4QAX6] | |
|---|---|
| Metabolite Information | |
| Molecular Function | structural constituent of ribosome |
| Biochemical Pathway | protein biosynthesis |
| Regulatory Pathway | |
| KEGG Pathways | K02880 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | ribosomal protein L17 [Homo sapiens] | 51 | 1e-47 | 186 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| thrC threonine synthase | Haemophilus influenzae | 26% | 2.2 | 25.8 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00387 | Ribosomal protein L22 signature | 126-150; | PS00464 | |
| Acylation | N-myristoylation site | 77-82; 106-111; | PS00008 | |
| Phosphorylation | cAMP- and cGMP-dependent protein kinase phosphorylation site | 126-129; | PS00004 | |
| Phosphorylation | Protein kinase C phosphorylation site | 5-7; 11-13; 14-16; 129-131; 151-153; | PS00005 | |
| 60S ribosomal protein L17, putative [Q4QAX6] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1s1iN | |
| Percent Identity | 55% | |
| Target Region | 1-152 | |
| Template Region | 1-147 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
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| Residue | Active Site Number | Functional Part |
| Co-Factor | |
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| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/155124/Q4QAX6.pdb 2.0 152 = residues | | = | *| Ramachandran plot: 65.4% core 21.3% allow 6.6% gener 6.6% = disall | | = | *| All Ramachandrans: 30 labelled residues (out of 150) = | *| Chi1-chi2 plots: 6 labelled residues (out of 93) = | | = | +| Main-chain params: 4 better 0 inside 2 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 4.4 Bad contacts: = 31 | *| Bond len/angle: 7.4 Morris et al class: 2 = 1 3 | +| 2 cis-peptides = | +| G-factors Dihedrals: -0.53 Covalent: -0.72 Overall: = -0.58 | | = | | M/c bond lengths: 95.9% within limits 4.1% highlighted = | *| M/c bond angles: 84.7% within limits 15.3% highlighted 4 off = graph | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |