| 40S ribosomal protein S16, putative [Q4Q9A5] | |
|---|---|
| Systematic Name | LmjF.26.0880 [Leishmania major] |
| Gene Name | LMJF_26_0880 |
| Molecular Weight | 16688 Da |
| Protein Sequence Size | 149 |
| Function | |
| Charge | 19.5 |
| Isoelectric Point | 10.7988 pH |
| Description | 40S ribosomal protein S16, putative. |
| Subcellular Location | intracellular; ribosome[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q9A5|Q4Q9A5_LEIMA 40S ribosomal protein S16, putative - Leishmania major PADKSYALKQVQTFGKKKTAIAVATVTKAAQCNIKVNGVPLQQILPDTLRAKIMEAITVV GSKYYSRLRIDVAVHGGGQVSQAYAARQAIAKGLIAFFQKYHNEVEKAALKDKFLAYDKF LLIADPRRCEPKKWGRHSARTRFTKSYR |
| DNA Sequence | >LmjF26.0880 |||40S ribosomal protein S16, putative|Leishmania major|chr 26|||Manual ATGCCCGCTG ACAAGAGCTA CGCGCTGAAG CAGGTGCAGA CCTTCGGCAA GAAGAAGACGGCAATCGCCG TGGCCACGGT CACCAAGGCT GCCCAGTGCA ACATCAAGGT GAACGGTGTGCCGCTGCAGC AGATCCTGCC CGATACGCTG CGCGCGAAGA TCATGGAGGC CATCACCGTGGTGGGATCCA AGTACTACTC GCGGCTGCGC ATCGATGTGG CGGTGCACGG TGGCGGCCAGGTGTCGCAGG CGTACGCCGC GCGCCAGGCG ATCGCGAAGG GCCTCATTGC GTTCTTTCAGAAGTACCACA ACGAGGTGGA GAAGGCCGCG CTGAAGGACA AGTTCCTGGC GTACGACAAGTTCCTGCTCA TCGCCGATCC CCGCCGCTGC GAGCCGAAGA AGTGGGGTCG CCACTCTGCCCGCACACGCT TCACCAAGTC CTACCGGTAA |
| 40S ribosomal protein S16, putative Q4Q9A5] | |
|---|---|
| Metabolite Information | |
| Molecular Function | structural constituent of ribosome |
| Biochemical Pathway | protein biosynthesis |
| Regulatory Pathway | |
| KEGG Pathways | K02960 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | ribosomal protein S16 [Homo sapiens] | 50 | 2e-28 | 121 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00311 | Ribosomal protein S9 signature | 77-95; | PS00360 | |
| Acylation | N-myristoylation site | 78-83; | PS00008 | |
| Amidation | Amidation site | 15-18; | PS00009 | |
| Phosphorylation | cAMP- and cGMP-dependent protein kinase phosphorylation site | 17-20; | PS00004 | |
| Phosphorylation | Protein kinase C phosphorylation site | 49-51; 139-141; 147-149; | PS00005 | |
| 40S ribosomal protein S16, putative [Q4Q9A5] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1s1hI | |
| Percent Identity | 49% | |
| Target Region | 10-148 | |
| Template Region | 4-139 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/180544/Q4Q9A5.pdb 2.0 140 = residues | | = | *| Ramachandran plot: 80.2% core 15.1% allow 4.0% gener 0.8% = disall | | = | *| All Ramachandrans: 20 labelled residues (out of 138) = | *| Chi1-chi2 plots: 4 labelled residues (out of 83) = | | = | +| Main-chain params: 5 better 0 inside 1 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 5.0 Bad contacts: = 17 | *| Bond len/angle: 23.7 Morris et al class: 1 = 2 3 | | = | +| G-factors Dihedrals: -0.33 Covalent: -1.68 Overall: = -0.80 | | = | *| M/c bond lengths: 95.1% within limits 4.9% highlighted 6 off = graph | *| M/c bond angles: 84.3% within limits 15.7% highlighted 14 off = graph | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |