| 40S ribosomal protein S33, putative [Q4Q931] | |
|---|---|
| Systematic Name | LmjF.26.1630 [Leishmania major] |
| Gene Name | S33-1 |
| Molecular Weight | 9746 Da |
| Protein Sequence Size | 87 |
| Function | |
| Charge | 5 |
| Isoelectric Point | 10.5 pH |
| Description | 40S ribosomal protein S33, putative. |
| Subcellular Location | intracellular; ribosome[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q931|Q4Q931_LEIMA 40S ribosomal protein S33, putative - Leishmania major ADSKKDNKKTEEVVTQGTDQAQVGLIIKVLGRTGSRGNVTQVRVRLMAEAGSPDYNRTIV RNVKGPCKENDMLSLMETEREARRLR |
| DNA Sequence | >LmjF26.1630 |S33-1||40S ribosomal protein S33, putative|Leishmania major|chr 26|||Manual ATGGCTGATT CGAAGAAGGA CAACAAGAAG ACCGAGGAGG TCGTCACCCA GGGTACGGACCAGGCCCAGG TTGGCCTAAT CATCAAGGTT CTGGGCCGCA CCGGCTCTCG CGGCAACGTGACCCAGGTGC GCGTGCGCCT GATGGCCGAG GCCGGCTCCC CGGACTACAA CCGCACGATCGTGCGCAACG TGAAGGGCCC ATGCAAGGAG AACGACATGC TCTCCCTCAT GGAAACCGAGCGTGAGGCCC GCCGTCTCCG TTAA |
| 40S ribosomal protein S33, putative Q4Q931] | |
|---|---|
| Metabolite Information | |
| Molecular Function | structural constituent of ribosome |
| Biochemical Pathway | protein biosynthesis |
| Regulatory Pathway | |
| KEGG Pathways | K02979 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | PREDICTED: similar to 40S ribosomal protein S28 [Homo sapiens] | 47 | 0.000000000000007 | 76 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| rpoC RNA polymerase | Salmonella typhimurium | 41% | 0.51 | 26.2 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00743 | Ribosomal protein S28e signature | 78-86; | PS00961 | |
| Acylation | N-myristoylation site | 18-23; 35-40; | PS00008 | |
| Glycosylation | N-glycosylation site | 39-42; 57-60; | PS00001 | |
| Phosphorylation | Casein kinase II phosphorylation site | 4-7; 75-78; 79-82; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 4-6; 79-81; | PS00005 | |
| 40S ribosomal protein S33, putative [Q4Q931] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1ny4A | |
| Percent Identity | 45% | |
| Target Region | 1-87 | |
| Template Region | 1-71 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
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| Residue | Active Site Number | Functional Part |
| Co-Factor | |
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| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/264784/Q4Q931.pdb 2.0 87 = residues | | = | *| Ramachandran plot: 85.5% core 10.5% allow 2.6% gener 1.3% = disall | | = | *| All Ramachandrans: 7 labelled residues (out of 85) = | +| Chi1-chi2 plots: 1 labelled residues (out of 52) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | +| Residue properties: Max.deviation: 4.0 Bad contacts: = 1 | +| Bond len/angle: 3.8 Morris et al class: 1 = 1 3 | | = | | G-factors Dihedrals: -0.13 Covalent: -0.20 Overall: = -0.15 | | = | | M/c bond lengths: 99.3% within limits 0.7% highlighted = | | M/c bond angles: 91.6% within limits 8.4% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |