| Ribosomal protein s20, putative [Q4Q8G4] | |
|---|---|
| Systematic Name | LmjF.28.1010 [Leishmania major] |
| Gene Name | LMJF_28_1010 |
| Molecular Weight | 13011 Da |
| Protein Sequence Size | 116 |
| Function | |
| Charge | 8 |
| Isoelectric Point | 10.5258 pH |
| Description | Ribosomal protein s20, putative. |
| Subcellular Location | intracellular; ribosome[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q8G4|Q4Q8G4_LEIMA Ribosomal protein s20, putative - Leishmania major DYPKKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKIT TRKTPCGNGTNTWDTFELKIYKRIIDLHAPTEQVKKITSFTMESGVDVSITILDR |
| DNA Sequence | >LmjF28.1010 |||ribosomal protein s20, putative|Leishmania major|chr 28|||Manual ATGGACTACC CGAAGAAGAA CCAGGCGGCG CCCGCGGAGG GCCAGACGGT GCGTCTGACGATCACGTCGC GCAACGCGAA GGCTGTGGAG TCTGTGACGT CGCAGCTGCT GACGCGCGCGCGCGATGAGA AGGTGACGAT CCACGGCCCG GTGCGTCTGC CGACGCGCAC GCTGAAGATCACGACCCGCA AGACGCCTTG CGGTAACGGT ACGAACACGT GGGACACGTT CGAGCTGAAGATCTACAAGC GCATCATCGA CCTTCACGCG CCGACGGAGC AGGTGAAGAA GATTACGAGCTTCACGATGG AGTCGGGCGT GGACGTGTCG ATCACGATCC TGGACCGGTA G |
| Ribosomal protein s20, putative Q4Q8G4] | |
|---|---|
| Metabolite Information | |
| Molecular Function | structural constituent of ribosome |
| Biochemical Pathway | protein biosynthesis |
| Regulatory Pathway | |
| KEGG Pathways | K02969 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | ribosomal protein S20 [Homo sapiens] | 54 | 1e-30 | 127 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YHL015w ribosomal protein | Saccharomyces cerevisiae | 49% | 2e-25 | 108 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| Acylation | N-myristoylation site | 68-73; 106-111; | PS00008 | |
| Glycosylation | N-glycosylation site | 69-72; | PS00001 | |
| Phosphorylation | cAMP- and cGMP-dependent protein kinase phosphorylation site | 96-99; | PS00004 | |
| Phosphorylation | Casein kinase II phosphorylation site | 105-108; 112-115; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 16-18; 22-24; 57-59; 61-63; 62-64; | PS00005 | |
| Ribosomal protein s20, putative [Q4Q8G4] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1s1hJ | |
| Percent Identity | 50% | |
| Target Region | 16-116 | |
| Template Region | 21-97 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/840912/Q4Q8G4.pdb 2.0 101 = residues | | = | +| Ramachandran plot: 85.7% core 11.0% allow 3.3% gener 0.0% = disall | | = | *| All Ramachandrans: 8 labelled residues (out of 99) = | | Chi1-chi2 plots: 0 labelled residues (out of 56) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | | Residue properties: Max.deviation: 2.9 Bad contacts: = 4 | +| Bond len/angle: 4.9 Morris et al class: 1 = 1 3 | | = | | G-factors Dihedrals: -0.16 Covalent: -0.31 Overall: = -0.22 | | = | | M/c bond lengths: 98.2% within limits 1.8% highlighted = | | M/c bond angles: 90.5% within limits 9.5% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |