| Mago nashi-like protein,putative [Q4Q6T2] | |
|---|---|
| Systematic Name | LmjF.30.3560 [Leishmania major] |
| Gene Name | LMJF_30_3560 |
| Molecular Weight | 18572 Da |
| Protein Sequence Size | 162 |
| Function | |
| Charge | -1 |
| Isoelectric Point | 6.1 pH |
| Description | Mago nashi-like protein,putative. |
| Subcellular Location | nucleus[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q6T2|Q4Q6T2_LEIMA Mago nashi-like protein,putative - Leishmania major AEQEDLAAVSPAETMESQLYYVRYYSGHTGRYGNEFLEFEISETGSLKYVNNSNYRNDFI IKKQARVSPAVLEEVKKLIVQYSVCESDDERWPAPDRNGRQELEIHLGNTHISLVTNKLT SMADIPKSSETVSLVRFYSFVRDVKALIFALVSIHFKIKPI |
| DNA Sequence | >LmjF30.3560 |||mago nashi-like protein,putative|Leishmania major|chr 30|||Manual ATGGCGGAAC AGGAAGACTT GGCCGCCGTC TCGCCGGCAG AGACGATGGA GTCTCAGCTGTACTACGTGC GGTATTACTC GGGCCATACT GGCCGCTACG GCAACGAGTT TCTTGAGTTCGAGATATCAG AGACCGGATC ACTAAAATAC GTCAACAACA GCAACTATAG AAACGACTTCATCATCAAGA AGCAAGCACG CGTGTCTCCA GCGGTGCTCG AGGAGGTGAA AAAGCTCATTGTGCAGTACT CGGTCTGCGA GAGTGACGAC GAGCGGTGGC CAGCTCCGGA TCGCAATGGGCGACAGGAGC TGGAGATTCA CCTCGGCAAC ACCCATATAT CGCTGGTGAC TAACAAGCTGACGTCGATGG CCGACATTCC GAAGAGCTCA GAGACCGTCA GCCTGGTGAG GTTCTACAGCTTTGTGCGGG ATGTTAAGGC GCTCATCTTC GCGCTGGTCT CCATTCACTT TAAAATTAAGCCGATCTGA |
| Mago nashi-like protein,putative Q4Q6T2] | |
|---|---|
| Metabolite Information | |
| Molecular Function | molecular function unknown |
| Biochemical Pathway | nuclear mRNA splicing, via spliceosome; sex determination |
| Regulatory Pathway | |
| KEGG Pathways | |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | mago-nashi homolog [Homo sapiens] | 51 | 2e-40 | 161 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YHR099w similarity to human DNA-PK | Saccharomyces cerevisiae | 46% | 4.8 | 24.6 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00595 | Formate--tetrahydrofolate ligase signatures | 52-55; | PS00722 | |
| Phosphorylation | Casein kinase II phosphorylation site | 11-14; 84-87; 88-91; 122-125; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 30-32; 47-49; 117-119; | PS00005 | |
| Mago nashi-like protein,putative [Q4Q6T2] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1rk8B | |
| Percent Identity | 49% | |
| Target Region | 18-162 | |
| Template Region | 4-127 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| 17787-72-3 | CALCIUM ION | 40.078 | Ca | [Ca+2] | 1rk8 |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/1237071/Q4Q6T2.pdb 2.0 144 = residues | | = | | Ramachandran plot: 93.1% core 6.9% allow 0.0% gener 0.0% = disall | | = | +| All Ramachandrans: 3 labelled residues (out of 142) = | +| Chi1-chi2 plots: 2 labelled residues (out of 93) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 2.9 Bad contacts: = 3 | *| Bond len/angle: 7.0 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.06 Covalent: -0.16 Overall: = -0.03 | | = | | M/c bond lengths: 99.2% within limits 0.8% highlighted = | | M/c bond angles: 94.2% within limits 5.8% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |