| 60S ribosomal protein L2, putative [Q4Q4N2] | |
|---|---|
| Systematic Name | LmjF.32.3900 [Leishmania major] |
| Gene Name | |
| Molecular Weight | 28273 Da |
| Protein Sequence Size | 260 |
| Function | |
| Charge | 36 |
| Isoelectric Point | 11.3323 pH |
| Description | 60S ribosomal protein L2, putative. |
| Subcellular Location | intracellular; ribosome[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q4N2|Q4Q4N2_LEIMA 60S ribosomal protein L2, putative - Leishmania major GKTVLSCRKGNGSVYQVHGHKRLGPAKLRILDYAERHGYMRGVVKSIEHEAGRGAALARV EFRHPYKFRRVKELMVAPEGMFTGQSVFCGQKAPLAIGNVLPLGQITEGCIVCNVEAKPG DRGTLARASGDYCIIISHNHETGRTRLKLPSGQKKSVPSTSRAMIGIISGGGRIEKPVLK AGNSFYRFRGKRNCWPKVRGVARNPVEHPHGGGNHQHIGHPSTVSRHSPPGQKVGLIAAR RTGRIRGGKAVKGAWHPEE |
| DNA Sequence | >LmjF32.3900 |||60S ribosomal protein L2, putative|Leishmania major|chr 32|||Manual ATGGGTAAGA CTGTGCTGAG CTGCCGTAAG GGCAACGGCT CCGTGTACCA GGTGCACGGCCACAAGCGCC TTGGCCCCGC CAAGCTGCGC ATTCTGGACT ACGCCGAGCG CCACGGCTACATGCGCGGTG TGGTGAAGTC GATCGAGCAC GAGGCTGGCC GCGGTGCGGC GCTGGCGCGCGTGGAGTTCC GCCACCCGTA CAAGTTCCGC CGCGTGAAGG AGCTGATGGT GGCGCCGGAGGGCATGTTCA CCGGCCAGTC GGTGTTCTGC GGCCAGAAGG CCCCGCTCGC GATCGGCAACGTGCTGCCCC TTGGCCAGAT CACGGAGGGC TGCATCGTGT GCAACGTGGA GGCGAAGCCCGGTGACCGCG GCACGCTGGC GCGCGCGTCC GGCGACTACT GCATCATCAT CTCGCACAACCACGAGACAG GCCGCACGCG CCTGAAGCTG CCGAGCGGGC AGAAGAAGTC CGTGCCGAGCACGAGTCGCG CGATGATCGG CATCATCAGC GGCGGTGGCC GCATCGAGAA GCCCGTGCTGAAGGCCGGTA ACTCGTTCTA CCGCTTCCGC GGCAAGCGCA ACTGCTGGCC CAAGGTGCGTGGTGTTGCCC GCAACCCGGT GGAGCACCCG CACGGTGGTG GTAACCATCA GCACATTGGCCACCCGTCGA CGGTGTCGCG CCACTCGCCG CCGGGCCAGA AGGTGGGTCT GATCGCTGCCCGCCGCACCG GCCGCATTCG CGGTGGTAAG GCTGTCAAGG GCGCGTGGCA CCCGGAGGAGTAA |
| 60S ribosomal protein L2, putative Q4Q4N2] | |
|---|---|
| Metabolite Information | protein biosynthesis |
| Molecular Function | |
| Biochemical Pathway | |
| Regulatory Pathway | |
| KEGG Pathways | K02886 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | ribosomal protein L8 [Homo sapiens] | 60 | 5e-86 | 314 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YFR031c a 221404 220496 RPL2A - ribosomal protein L8.e | Saccharomyces cerevisiae | 60% | 3e-84 | 305 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| Acylation | N-myristoylation site | 43-48; 55-60; 81-86; 110-115; 153-158; 167-172; 232-237; 236-241; | PS00008 | |
| Amidation | Amidation site | 190-193; | PS00009 | |
| Glycosylation | N-glycosylation site | 12-15; | PS00001 | |
| Phosphorylation | Protein kinase C phosphorylation site | 7-9; 143-145; 161-163; 243-245; | PS00005 | |
| 60S ribosomal protein L2, putative [Q4Q4N2] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1s1iB | |
| Percent Identity | 60% | |
| Target Region | 1-245 | |
| Template Region | 1-244 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
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| Residue | Active Site Number | Functional Part |
| Co-Factor | |
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| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/2738205/Q4Q4N2.pdb 2.0 245 = residues | | = | *| Ramachandran plot: 63.4% core 25.8% allow 6.2% gener 4.6% = disall | | = | *| All Ramachandrans: 47 labelled residues (out of 243) = | *| Chi1-chi2 plots: 5 labelled residues (out of 130) = | | = | +| Main-chain params: 5 better 0 inside 1 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 4.2 Bad contacts: = 21 | *| Bond len/angle: 6.6 Morris et al class: 3 = 1 3 | +| 3 cis-peptides = | +| G-factors Dihedrals: -0.62 Covalent: -0.72 Overall: = -0.63 | | = | | M/c bond lengths: 97.1% within limits 2.9% highlighted = | *| M/c bond angles: 84.1% within limits 15.9% highlighted 2 off = graph | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |