| 40S ribosomal protein S3, putative [Q4Q4A0] | |
|---|---|
| Systematic Name | LmjF.15.0950 [Leishmania major] |
| Gene Name | LMJF_15_0950 |
| Molecular Weight | 24472 Da |
| Protein Sequence Size | 219 |
| Function | |
| Charge | 16.5 |
| Isoelectric Point | 10.3512 pH |
| Description | 40S ribosomal protein S3, putative. |
| Subcellular Location | cytosolic small ribosomal subunit (sensu Eukaryota); intracellular; ribosome; small ribosomal subunit[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q4A0|Q4Q4A0_LEIMA 40S ribosomal protein S3, putative - Leishmania major GPLSKKRMIIRDGVFYAELFEFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVN GRRIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGI IRYVMESGAKGCEVTVGGKIKGQRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCI GVKVKIMLPGDSTGRNGPSEPLPDVITVIEPKQITASE |
| DNA Sequence | >LmjF15.0950 |||40S ribosomal protein S3, putative|Leishmania major|chr 15|||Manual ATGGGTCCTC TCTCCAAGAA GCGCATGATC ATCCGCGACG GCGTGTTCTA CGCCGAGCTGTTTGAGTTTC TCAAGCGCGA GCTGGCCGAA GAGGGCTTCT CCGGTGTCTC CTACCACGTCACGACGCTCC GCACGGAGAT CGTGATCAAG GCGACGAAGA CCCGTGAGGT GCTCGGCGTGAACGGCCGCC GCATCCGCGA GCTGACAGCC TGCATTCAGC AGCGCTTCAA CTACAAGGAGGGCAAGCTCC AGCTGTACGT TGAGCGCGTT GAGGTGCGTG GTCTGTCCGC GATGGCGCAGGTGGAGTCCC TCCGCTTCAA GCTCCTGAGC AACCTGCAGG TGCGCCGCGC CGCCATGGGCATCATCCGCT ACGTCATGGA GTCCGGTGCC AAGGGCTGCG AGGTCACCGT CGGTGGAAAGATCAAGGGCC AGCGTGCGAA GAGCATGACC TTCCGCGACG GCTACATGAT CAAGTCCGGTACGGCTCACA AGTCCTTCGT CGACTCCGCC TGCCGCCACT GCTACATGCG CGCCGGCTGCATCGGTGTCA AGGTCAAGAT CATGCTTCCC GGTGACTCGA CTGGCCGCAA CGGCCCGTCGGAGCCGCTGC CGGACGTCAT CACCGTCATT GAGCCGAAGC AGATCACCGC GTCTGAGTAA |
| 40S ribosomal protein S3, putative Q4Q4A0] | |
|---|---|
| Metabolite Information | |
| Molecular Function | nucleic acid binding; structural constituent of ribosome |
| Biochemical Pathway | protein biosynthesis; ribosome biogenesis |
| Regulatory Pathway | |
| KEGG Pathways | K02985 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | ribosomal protein S3 [Homo sapiens] | 60 | 7e-70 | 260 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YNL178w ribosomal protein S3.e | Saccharomyces cerevisiae | 58% | 3e-67 | 248 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC50084 | KH domain profiles | 10.416 | 20-91 | PS50823 |
| Acylation | N-myristoylation site | 14-19; 129-134; 132-137; | PS00008 | |
| Amidation | Amidation site | 61-64; | PS00009 | |
| Phosphorylation | Casein kinase II phosphorylation site | 150-153; 165-168; 208-211; 216-219; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 5-7; 42-44; 103-105; 150-152; 194-196; | PS00005 | |
| 40S ribosomal protein S3, putative [Q4Q4A0] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1s1hC | |
| Percent Identity | 60% | |
| Target Region | 1-192 | |
| Template Region | 5-188 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
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| Residue | Active Site Number | Functional Part |
| Co-Factor | |
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| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/2670054/Q4Q4A0.pdb 2.0 192 = residues | | = | *| Ramachandran plot: 85.8% core 11.2% allow 2.4% gener 0.6% = disall | | = | *| All Ramachandrans: 10 labelled residues (out of 190) = | +| Chi1-chi2 plots: 3 labelled residues (out of 116) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | +| Residue properties: Max.deviation: 4.0 Bad contacts: = 4 | +| Bond len/angle: 4.7 Morris et al class: 1 = 1 3 | | = | | G-factors Dihedrals: -0.02 Covalent: -0.20 Overall: = -0.09 | | = | | M/c bond lengths: 99.5% within limits 0.5% highlighted = | | M/c bond angles: 93.3% within limits 6.7% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |