LeishBase: Leishmania Structural Database
header
Home List of Proteins How to Visualize Structures Download Contact Us
Guanylate kinase, putative [Q4Q481]
Systematic NameLmjF.33.1090 [Leishmania major]
Gene NameLMJF_33_1090
Molecular Weight22931 Da
Protein Sequence Size203
Function
Charge-0.5
Isoelectric Point6.3 pH
DescriptionGuanylate kinase, putative (EC 2.7.4.8).
Subcellular LocationN.A.[Predict]
E. C. Number 2.7.4.8
Sequence>tr|Q4Q481|Q4Q481_LEIMA Guanylate kinase, putative (EC 2.7.4.8) - Leishmania major.
SKPLNALVVCGPSGVGKGTLLGRLLREYPNRFAYSVSHTTRQPRQGEVNGREYHFTDRES
ILKMRDNNEFLELCDVHGNFYGTSVAAVHAVQKEGKVCVIEIDVKGAQKLFSRTDNALNA
VYFFITAPREELRKRIMKRGADDETMLQRRLETAESEYKFVDENPDFFSVLLVNDELEAA
YAGLLAAIDDQLVKHNMEKLAA
DNA Sequence>LmjF33.1090 |||guanylate kinase, putative|Leishmania major|chr 33|||Manual
ATGAGCAAGC CGTTGAACGC GCTGGTGGTC TGTGGTCCCT CTGGGGTAGG CAAGGGAACCCTGCTGGGCC GCCTCCTCCG CGAGTACCCC AACCGCTTCG CCTACTCGGT GTCGCACACAACACGTCAAC CGCGCCAGGG AGAGGTGAAT GGGCGCGAGT ACCACTTTAC CGACCGTGAGAGCATCCTCA AGATGCGCGA CAATAACGAG TTCCTCGAGC TGTGCGACGT GCACGGCAACTTCTACGGCA CGAGCGTTGC CGCCGTGCAC GCTGTGCAGA AGGAAGGGAA GGTGTGCGTCATCGAGATCG ATGTAAAGGG GGCACAGAAA CTGTTCAGCC GTACCGATAA TGCGCTGAACGCCGTGTACT TCTTTATCAC GGCCCCCAGA GAGGAGCTGC GCAAGCGTAT CATGAAGCGTGGCGCCGATG ACGAAACAAT GCTGCAGCGG CGTCTAGAGA CAGCCGAGTC AGAGTACAAGTTCGTCGATG AAAATCCCGA CTTCTTCTCT GTGCTGCTGG TGAATGATGA GCTAGAGGCAGCGTACGCTG GCCTCTTGGC CGCCATCGAC GACCAGCTGG TGAAGCACAA CATGGAGAAGCTGGCTGCCT AG
Guanylate kinase, putative Q4Q481]
Metabolite Informationnucleobase, nucleoside and nucleotide interconversion
Molecular Function
Biochemical Pathway
Regulatory Pathway
KEGG PathwaysK00942
Orthologs
Homologs GI Percent Identity Evalue Score
Homo sapiensguanylate kinase 1 [Homo sapiens]364e-30128
DEG Information
DEG Protein DEG Organism Percent Identity Evalue Bit Score
YDR454c guanylate kinaseSaccharomyces cerevisiae41%3e-35142
Post Translational Modification
PTM Type PTM Sub Type Score Modification Site Prosite ID
PDOC00670Guanylate kinase-like signature and profile40-57; PS00856
PDOC00670Guanylate kinase-like signature and profile35.5185-190PS50052
AcylationN-myristoylation site15-20; 19-24; 79-84; 83-88; 184-189; PS00008
PhosphorylationCasein kinase II phosphorylation site57-60; 113-116; PS00006
PhosphorylationProtein kinase C phosphorylation site40-42; 57-59; PS00005
SulfationTyrosine sulfation site152-166; PS00003
Guanylate kinase, putative [Q4Q481]
Model Information
Template PDB ID1gkyA
Percent Identity41%
Target Region5-193
Template Region1-186
Domain Information
Domains Start End
Active Site Information
Residue Active Site Number Functional Part
Co-Factor
Metal Description
Ligands
CAS number Name Mol. Weight Mol. Formula Smile Notation PDB Reference
85-32-5GUANOSINE-5'-MONOPHOSPHATE363.221C10 H14 N5 O8 PO=C1c2ncn(c2N=C(N)N1)C3OC(C(O)C3O)COP(=O)(O)O1gky
ACETYL GROUP44.053C2 H4 OO=CC1gky
14808-79-8SULFATE ION96.063O4 S[O-]S([O-])(=O)=O1gky
Mutational Information
Residue Feature Description
Modeled Protein Template Structure
+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/2455296/Q4Q481.pdb 2.0 189 = residues | | = | | Ramachandran plot: 95.9% core 4.1% allow 0.0% gener 0.0% = disall | | = | +| All Ramachandrans: 1 labelled residues (out of 187) = | +| Chi1-chi2 plots: 3 labelled residues (out of 119) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | +| Residue properties: Max.deviation: 5.5 Bad contacts: = 1 | +| Bond len/angle: 4.6 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.16 Covalent: -0.11 Overall: = 0.06 | | = | | M/c bond lengths: 99.5% within limits 0.5% highlighted = | | M/c bond angles: 95.3% within limits 4.7% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further.
Overlapped Structure Procheck Summary
LeishBase: Leishmania Structural Database