| Hypothetical protein [Q4Q453] | |
|---|---|
| Systematic Name | LmjF.33.1350 [Leishmania major] |
| Gene Name | LMJF_33_1350 |
| Molecular Weight | 20616 Da |
| Protein Sequence Size | 181 |
| Function | |
| Charge | 8.5 |
| Isoelectric Point | 9.8 pH |
| Description | Hypothetical protein. |
| Subcellular Location | N.A.[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q453|Q4Q453_LEIMA Hypothetical protein - Leishmania major. RPLTDDETKKLFDKLAQYIGANTTHLLERKGEEEHVFRLHKNRIWYMPLRLAKLASCVSK TNLMGIGVLFAKVTHNGNVRIQVTALEYIAQYSLFKIWVKPNQEQKFLYGGNVSRAGLGR ITESTPKYQKVAVFSMGDIPLGFGVAAQSTLECRKCEMNSQVLFHEADVGEYLRDEARMT |
| DNA Sequence | >LmjF33.1350 |||hypothetical protein, conserved|Leishmania major|chr 33|||Manual ATGAGGCCTC TCACAGATGA CGAGACGAAA AAGCTCTTTG ACAAGCTTGC ACAGTACATCGGGGCCAACA CAACGCACTT GCTAGAGCGA AAAGGCGAGG AGGAGCACGT CTTTCGCCTCCACAAGAATC GTATATGGTA CATGCCTTTG CGTCTCGCAA AGCTTGCGAG CTGTGTGTCCAAGACAAATC TAATGGGTAT CGGCGTTTTA TTCGCCAAGG TTACTCACAA CGGAAACGTACGCATTCAGG TGACAGCGCT AGAGTACATC GCGCAGTACT CACTCTTCAA GATTTGGGTAAAGCCGAACC AAGAGCAGAA ATTCCTGTAC GGTGGAAACG TCAGTCGCGC AGGCCTTGGCCGTATCACCG AGTCGACACC GAAGTACCAA AAGGTCGCCG TCTTTTCAAT GGGCGATATCCCATTAGGTT TCGGTGTCGC GGCCCAAAGC ACGCTGGAAT GCCGAAAGTG CGAAATGAACTCACAAGTGC TTTTTCATGA GGCCGATGTT GGTGAGTACT TGCGTGATGA GGCTCGCATGACATAG |
| Hypothetical protein Q4Q453] | |
|---|---|
| Metabolite Information | |
| Molecular Function | |
| Biochemical Pathway | |
| Regulatory Pathway | |
| KEGG Pathways | K07565 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | 60S ribosome subunit biogenesis protein NIP7 homolog [Homo sapiens] | 49 | 1e-49 | 192 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YPL211w required for efficient 60S ribosome subunit biogenesis | Saccharomyces cerevisiae | 48% | 1e-46 | 179 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00595 | Formate--tetrahydrofolate ligase signatures | 23-26; 113-116; | PS00722 | |
| PDOC50890 | PUA domain profile | 11.945 | 95-171 | PS50890 |
| Acylation | N-myristoylation site | 21-26; 68-73; 111-116; | PS00008 | |
| Glycosylation | N-glycosylation site | 23-26; 113-116; | PS00001 | |
| Phosphorylation | Casein kinase II phosphorylation site | 5-8; 85-88; 136-139; 150-153; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 9-11; 126-128; | PS00005 | |
| Sulfation | Tyrosine sulfation site | 166-180; | PS00003 | |
| Hypothetical protein [Q4Q453] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1t5yA | |
| Percent Identity | 49% | |
| Target Region | 1-171 | |
| Template Region | 1-170 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/4113421/Q4Q453.pdb 2.0 171 = residues | | = | +| Ramachandran plot: 93.4% core 5.3% allow 1.3% gener 0.0% = disall | | = | +| All Ramachandrans: 3 labelled residues (out of 169) = | | Chi1-chi2 plots: 0 labelled residues (out of 107) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | | Residue properties: Max.deviation: 2.4 Bad contacts: = 0 | +| Bond len/angle: 4.8 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.08 Covalent: -0.12 Overall: = 0.00 | | = | | M/c bond lengths: 99.8% within limits 0.2% highlighted = | | M/c bond angles: 93.6% within limits 6.4% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |