| 60S ribosomal protein L44, putative [Q4Q3L3] | |
|---|---|
| Systematic Name | LmjF.13.1670 [Leishmania major] |
| Gene Name | LMJF_13_1670 |
| Molecular Weight | 12268 Da |
| Protein Sequence Size | 106 |
| Function | |
| Charge | 28 |
| Isoelectric Point | 11.2391 pH |
| Description | 60S ribosomal protein L44, putative. |
| Subcellular Location | cytosolic large ribosomal subunit (sensu Eukaryota); intracellular; ribosome[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q3L3|Q4Q3L3_LEIMA 60S ribosomal protein L44, putative - Leishmania major. VNYPKKKVMHCGDARCNAHKSFKVVQYKAGKARLFARGKRRYDRKQSGYGGQTKPVFHKK AKTTKKIVLKLQCSGCKSIRQVVLKRTKHFELNDKKKTGNKDPTW |
| DNA Sequence | >LmjF13.1670 |||60S ribosomal protein L44, putative|Leishmania major|chr 13|||Manual ATGGTGAACT ACCCGAAGAA GAAGGTGATG CACTGCGGCG ACGCGCGCTG CAACGCGCACAAGTCGTTCA AGGTGGTGCA GTACAAGGCC GGCAAGGCCC GCCTTTTCGC TCGGGGTAAGCGTCGTTACG ATCGCAAGCA GTCTGGTTAT GGCGGTCAGA CCAAGCCTGT CTTTCACAAGAAGGCCAAGA CGACCAAGAA GATTGTGCTG AAGCTCCAGT GCTCTGGTTG CAAGTCTATCCGCCAGGTTG TCCTCAAGCG CACGAAGCAC TTTGAGCTGA ACGATAAGAA GAAGACGGGCAACAAGGACC CCACCTGGTA A |
| 60S ribosomal protein L44, putative Q4Q3L3] | |
|---|---|
| Metabolite Information | |
| Molecular Function | structural constituent of ribosome |
| Biochemical Pathway | protein biosynthesis |
| Regulatory Pathway | |
| KEGG Pathways | K02929 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | PREDICTED: similar to large subunit ribosomal protein L36a [Homo sapiens] | 53 | 2e-24 | 107 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YJR136c cyclic-GMP phosphodiesterase | Saccharomyces cerevisiae | 28% | 2.4 | 23.9 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00902 | Ribosomal protein L44e signature | 63-74; | PS01172 | |
| Amidation | Amidation site | 38-41; | PS00009 | |
| Phosphorylation | cAMP- and cGMP-dependent protein kinase phosphorylation site | 45-48; 96-99; | PS00004 | |
| Phosphorylation | Protein kinase C phosphorylation site | 22-24; 64-66; 65-67; 79-81; | PS00005 | |
| 60S ribosomal protein L44, putative [Q4Q3L3] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1s1iZ | |
| Percent Identity | 57% | |
| Target Region | 1-92 | |
| Template Region | 1-91 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
|
|
|
| Modeled Protein | Template Structure |
|
|
+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/642097/Q4Q3L3.pdb 2.0 92 = residues | | = | *| Ramachandran plot: 76.5% core 18.5% allow 4.9% gener 0.0% = disall | | = | *| All Ramachandrans: 10 labelled residues (out of 90) = | +| Chi1-chi2 plots: 1 labelled residues (out of 57) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 2.7 Bad contacts: = 5 | *| Bond len/angle: 6.7 Morris et al class: 1 = 1 4 | +| 1 cis-peptides = | | G-factors Dihedrals: -0.30 Covalent: -0.48 Overall: = -0.35 | | = | | M/c bond lengths: 98.0% within limits 2.0% highlighted = | *| M/c bond angles: 89.2% within limits 10.8% highlighted 1 off = graph | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |