| Ubiquitin-like protein [Q4Q2Y8] | |
|---|---|
| Systematic Name | LmjF.34.2125 [Leishmania major] |
| Gene Name | LMJF_34_2125 |
| Molecular Weight | 8670 Da |
| Protein Sequence Size | 80 |
| Function | |
| Charge | 0 |
| Isoelectric Point | 6.5 pH |
| Description | Ubiquitin-like protein. |
| Subcellular Location | nucleus[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q2Y8|Q4Q2Y8_LEIMA Ubiquitin-like protein - Leishmania major. TFSFSVISTTGQRISISVLGPDNTVGDIKAKLEETEGIPQKMIMLVHSGRKLEDNATLEE CNIHAGITINMVLALRAGR |
| DNA Sequence | >LmjF34.2125 |||ubiquitin-like protein|Leishmania major|chr 34|||Manual ATGACCTTCT CTTTTAGCGT CATCTCGACC ACGGGGCAGC GGATCTCCAT CTCTGTACTCGGTCCGGATA ACACTGTAGG CGACATCAAG GCGAAACTTG AGGAGACGGA AGGCATTCCGCAGAAGATGA TCATGCTGGT GCACTCTGGC CGAAAACTGG AAGACAACGC AACCCTGGAGGAATGCAACA TACACGCTGG CATCACAATC AATATGGTGC TGGCTCTGCG TGCAGGCCGCTGA |
| Ubiquitin-like protein Q4Q2Y8] | |
|---|---|
| Metabolite Information | protein modification; ubiquitin-dependent protein catabolism |
| Molecular Function | |
| Biochemical Pathway | |
| Regulatory Pathway | |
| KEGG Pathways | |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | ubiquitin C [Homo sapiens] | 39 | 0.000000001 | 58 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YLR106c associated herpes-like virus ORF73 h | Saccharomyces cerevisiae | 29% | 0.18 | 27.7 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00595 | Formate--tetrahydrofolate ligase signatures | 56-59; | PS00722 | |
| PDOC00271 | Ubiquitin domain signature and profile | 16.821 | 01-03-1979 00:00:00 | PS50053 |
| Acylation | N-myristoylation site | 12-17; 67-72; | PS00008 | |
| Amidation | Amidation site | 49-52; | PS00009 | |
| Glycosylation | N-glycosylation site | 56-59; | PS00001 | |
| Phosphorylation | Casein kinase II phosphorylation site | 25-28; 58-61; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 49-51; | PS00005 | |
| Ubiquitin-like protein [Q4Q2Y8] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1yx6B | |
| Percent Identity | 40% | |
| Target Region | 1-79 | |
| Template Region | 1-76 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/102429/Q4Q2Y8.pdb 2.0 79 = residues | | = | | Ramachandran plot: 92.8% core 7.2% allow 0.0% gener 0.0% = disall | | = | +| All Ramachandrans: 1 labelled residues (out of 77) = | *| Chi1-chi2 plots: 2 labelled residues (out of 46) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | | Residue properties: Max.deviation: 2.4 Bad contacts: = 0 | +| Bond len/angle: 3.6 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.02 Covalent: -0.18 Overall: = -0.06 | | = | | M/c bond lengths: 99.2% within limits 0.8% highlighted = | | M/c bond angles: 92.7% within limits 7.3% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |