| Nuclear protein family a (Nop10p), putative [Q4Q244] | |
|---|---|
| Systematic Name | LmjF.36.0340 [Leishmania major] |
| Gene Name | LMJF_36_0340 |
| Molecular Weight | 7453 Da |
| Protein Sequence Size | 63 |
| Function | |
| Charge | 11.5 |
| Isoelectric Point | 11.6033 pH |
| Description | Nuclear protein family a (Nop10p), putative. |
| Subcellular Location | nucleolus[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q244|Q4Q244_LEIMA Nuclear protein family a (Nop10p), putative - Leishmania major. HLRVYMVDGKRVYTLKKVDPEGKPTLSAHPARFSPDDKLSRHRVTIKRRFKVLPSERRLQ PL |
| DNA Sequence | >LmjF36.0340 |||nuclear protein family a (nop10p), putative|Leishmania major|chr 36|||Manual ATGCACCTTC GAGTGTACAT GGTCGACGGT AAGCGTGTCT ACACGCTAAA GAAGGTGGATCCGGAGGGCA AGCCGACTCT GAGCGCCCAC CCCGCCCGCT TCAGCCCAGA TGACAAGCTCAGTCGCCACC GCGTCACCAT CAAGCGCCGT TTCAAGGTGC TGCCGTCGGA GCGTCGCCTGCAGCCGCTGT AG |
| Nuclear protein family a (Nop10p), putative Q4Q244] | |
|---|---|
| Metabolite Information | rRNA metabolism |
| Molecular Function | |
| Biochemical Pathway | |
| Regulatory Pathway | |
| KEGG Pathways | |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | nucleolar protein family A, member 3 [Homo sapiens] | 66 | 3e-16 | 80 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YHR072w-a a 241664 241837 NOP10 - nucleolar rRNA processing protein | Saccharomyces cerevisiae | 62% | 0.000000000000004 | 73.2 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| Amidation | Amidation site | 9-12; | PS00009 | |
| Phosphorylation | Casein kinase II phosphorylation site | 35-38; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 15-17; 46-48; 56-58; | PS00005 | |
| Nuclear protein family a (Nop10p), putative [Q4Q244] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 1y2yA | |
| Percent Identity | 62% | |
| Target Region | 1-63 | |
| Template Region | 1-58 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/786208/Q4Q244.pdb 2.0 63 = residues | | = | *| Ramachandran plot: 58.5% core 22.6% allow 15.1% gener 3.8% = disall | | = | *| All Ramachandrans: 13 labelled residues (out of 61) = | | Chi1-chi2 plots: 0 labelled residues (out of 40) = | | = | +| Main-chain params: 5 better 0 inside 1 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 4.0 Bad contacts: = 8 | *| Bond len/angle: 7.6 Morris et al class: 3 = 1 3 | | = | +| G-factors Dihedrals: -0.38 Covalent: -0.52 Overall: = -0.42 | | = | | M/c bond lengths: 98.7% within limits 1.3% highlighted = | | M/c bond angles: 86.6% within limits 13.4% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |