| SNF7-like protein [Q4Q174] | |
|---|---|
| Systematic Name | LmjF.36.3440 [Leishmania major] |
| Gene Name | LMJF_36_3440 |
| Molecular Weight | 24791 Da |
| Protein Sequence Size | 216 |
| Function | |
| Charge | -1.5 |
| Isoelectric Point | 5.6 pH |
| Description | SNF7-like protein. |
| Subcellular Location | cytoplasm; membrane[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q174|Q4Q174_LEIMA SNF7-like protein - Leishmania major PVFGNMFHRTTPEEEVRKWTRSLRSEQRKIELQITKIRREEAKVKLSMKQAAKQNDQVVM RMLAKEMIRSRKAVNRMYASKAQMNSVSMQLQNQASQMKMSGSLKKSGEIMKEMNSLVKV KEVQQSMMAMSKEMVKAGLIDEIMNDTIDEALDDDISDTELEDEVNKVVMDVVQGQMDGA RVGASRIPAQQQQQQETAEEEEDELMEKLNALRNS |
| DNA Sequence | >LmjF36.3440 |||SNF7-like protein|Leishmania major|chr 36|||Manual ATGCCCGTAT TCGGTAACAT GTTCCACAGG ACGACGCCGG AGGAGGAGGT GCGCAAGTGGACGCGCAGTC TGCGCTCGGA GCAGCGCAAG ATCGAGCTTC AAATCACCAA GATCCGCCGCGAGGAGGCCA AGGTAAAACT GTCGATGAAG CAGGCAGCAA AACAGAATGA CCAGGTGGTGATGCGGATGC TGGCGAAGGA GATGATTCGC TCTCGCAAGG CGGTGAACCG AATGTACGCCTCGAAGGCGC AGATGAACTC CGTGTCCATG CAGTTGCAGA ACCAGGCGAG TCAGATGAAGATGTCCGGCT CGCTCAAGAA GAGCGGTGAA ATAATGAAAG AGATGAACAG TCTCGTCAAGGTGAAGGAGG TTCAGCAGTC CATGATGGCA ATGAGCAAAG AAATGGTCAA AGCAGGGCTGATCGACGAGA TTATGAACGA CACGATCGAT GAAGCACTGG ACGACGACAT CAGCGATACAGAGCTCGAGG ACGAGGTGAA CAAGGTGGTG ATGGACGTGG TTCAGGGTCA GATGGACGGCGCACGCGTCG GTGCCTCTCG TATCCCGGCA CAGCAGCAGC AGCAGCAGGA GACTGCGGAGGAAGAAGAAG ATGAGCTCAT GGAGAAGCTC AATGCGCTGC GCAACTCGTA A |
| SNF7-like protein Q4Q174] | |
|---|---|
| Metabolite Information | vesicle-mediated transport |
| Molecular Function | |
| Biochemical Pathway | |
| Regulatory Pathway | |
| KEGG Pathways | |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | vacuolar protein sorting 24 isoform 1 [Homo sapiens] | 45 | 1e-39 | 160 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| YDR473c essential splicing factor | Saccharomyces cerevisiae | 29% | 0.11 | 30.8 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00595 | Formate--tetrahydrofolate ligase signatures | 146-149; | PS00722 | |
| Acylation | N-myristoylation site | 176-181; 180-185; | PS00008 | |
| Glycosylation | N-glycosylation site | 146-149; | PS00001 | |
| Phosphorylation | cAMP- and cGMP-dependent protein kinase phosphorylation site | 18-21; | PS00004 | |
| Phosphorylation | Casein kinase II phosphorylation site | 11-14; 12-15; 148-151; 158-161; 160-163; 198-201; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 23-25; 48-50; 71-73; 104-106; | PS00005 | |
| SNF7-like protein [Q4Q174] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 2gd5D | |
| Percent Identity | 46% | |
| Target Region | 6-182 | |
| Template Region | 5-162 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
|---|---|---|
| Residue | Active Site Number | Functional Part |
| Co-Factor | |
|---|---|
| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/545952/Q4Q174.pdb 2.0 177 = residues | | = | *| Ramachandran plot: 95.3% core 3.6% allow 0.6% gener 0.6% = disall | | = | +| All Ramachandrans: 3 labelled residues (out of 175) = | +| Chi1-chi2 plots: 3 labelled residues (out of 123) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | *| Residue properties: Max.deviation: 4.0 Bad contacts: = 2 | *| Bond len/angle: 5.1 Morris et al class: 1 = 1 2 | | = | | G-factors Dihedrals: 0.25 Covalent: -0.08 Overall: = 0.13 | | = | | M/c bond lengths: 99.8% within limits 0.2% highlighted = | | M/c bond angles: 96.2% within limits 3.8% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |