| 40S ribosomal protein SA, putative [Q4Q0Q0] | |
|---|---|
| Systematic Name | LmjF.36.5010 [Leishmania major] |
| Gene Name | LmjF36.5120 |
| Molecular Weight | 27500 Da |
| Protein Sequence Size | 246 |
| Function | |
| Charge | 4 |
| Isoelectric Point | 7.901 pH |
| Description | 40S ribosomal protein SA, putative. |
| Subcellular Location | cytosolic small ribosomal subunit (sensu Eukaryota); intracellular; organellar small ribosomal subunit; ribosome; small ribosomal subunit[Predict] |
| E. C. Number | N.A. |
| Sequence | >tr|Q4Q0Q0|Q4Q0Q0_LEIMA 40S ribosomal protein SA, putative - Leishmania major SAVESGSKVLRMKESDAQKLLAMRCHIGTRNQSSAMKKYIYGRTAEGSHIIDVHMMWEKL ILAARVIAAVENPKDVCVCSSRLYGTRAIYKFSQHVGTSFHGGRFIPGTFTNQIQKKFVQ PRVLVVTDPRTDHQAIREASLVNIPVIALCDTDAPLEYVDIAIPCNNRGIKSIGMMYWLL AREVLRLRGTIVRSVPWEEKVDLFFYRDPNEAAEEKAAAAAAAPAAEAEEGFGWVERNDD NAWEA |
| DNA Sequence | >LmjF36.5010 |||40S ribosomal protein SA, putative|Leishmania major|chr 36|||Manual ATGTCCGCTG TGGAGTCTGG CTCGAAGGTT CTCCGGATGA AGGAGAGCGA CGCGCAGAAGCTGCTCGCGA TGCGCTGCCA CATTGGCACG CGCAACCAGA GCAGTGCGAT GAAGAAGTACATCTACGGCC GCACGGCGGA GGGCAGCCAC ATCATTGACG TGCACATGAT GTGGGAGAAGCTAATCCTCG CTGCTCGCGT GATCGCTGCT GTGGAGAACC CGAAGGACGT GTGCGTGTGCTCGTCGCGCC TGTACGGCAC GCGCGCCATC TACAAGTTCT CGCAGCACGT GGGCACGAGCTTCCACGGGG GCCGCTTCAT CCCTGGTACG TTCACGAACC AGATCCAGAA AAAGTTCGTGCAGCCGCGCG TGCTTGTGGT GACGGACCCG CGTACGGACC ACCAGGCCAT CCGCGAGGCGTCGCTGGTGA ACATCCCTGT GATTGCGCTG TGCGACACGG ACGCGCCGCT GGAGTATGTGGACATTGCGA TCCCGTGCAA CAACCGCGGC ATCAAGTCGA TCGGCATGAT GTACTGGCTGCTTGCGCGCG AGGTGCTGCG CCTGCGCGGC ACGATTGTGC GCTCTGTGCC GTGGGAGGAGAAGGTGGACC TGTTCTTCTA CCGCGACCCC AACGAGGCTG CGGAGGAGAA GGCCGCCGCGGCCGCTGCGG CGCCCGCCGC GGAGGCGGAG GAGGGCTTCG GCTGGGTGGA GCGCAACGACGACAACGCGT GGGAGGCGTA A |
| 40S ribosomal protein SA, putative Q4Q0Q0] | |
|---|---|
| Metabolite Information | protein biosynthesis |
| Molecular Function | |
| Biochemical Pathway | |
| Regulatory Pathway | |
| KEGG Pathways | K02998 |
| Orthologs | ||||
| Homologs | GI | Percent Identity | Evalue | Score |
| Homo sapiens | ribosomal protein SA [Homo sapiens] | 60 | 2e-66 | 249 |
| DEG Information | ||||
| DEG Protein | DEG Organism | Percent Identity | Evalue | Bit Score |
| rpsB 30S ribosomal protein S2 | Staphylococcus aureus | 23% | 0.000000001 | 57.4 |
| Post Translational Modification | ||||
| PTM Type | PTM Sub Type | Score | Modification Site | Prosite ID |
| PDOC00595 | Formate--tetrahydrofolate ligase signatures | 32-35; | PS00722 | |
| PDOC00744 | Ribosomal protein S2 signatures | 122-146; | PS00963 | |
| Acylation | N-myristoylation site | 109-114; | PS00008 | |
| Glycosylation | N-glycosylation site | 32-35; | PS00001 | |
| Phosphorylation | Casein kinase II phosphorylation site | 2-5; | PS00006 | |
| Phosphorylation | Protein kinase C phosphorylation site | 81-83; | PS00005 | |
| 40S ribosomal protein SA, putative [Q4Q0Q0] | ||
|---|---|---|
| Model Information | ||
| Template PDB ID | 3bchA | |
| Percent Identity | 58% | |
| Target Region | 12-208 | |
| Template Region | 9-197 | |
| Domain Information | ||
|---|---|---|
| Domains | Start | End |
| Active Site Information | ||
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| Residue | Active Site Number | Functional Part |
| Co-Factor | |
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| Metal | Description |
| Ligands | |||||
|---|---|---|---|---|---|
| CAS number | Name | Mol. Weight | Mol. Formula | Smile Notation | PDB Reference |
| Mutational Information | ||
|---|---|---|
| Residue | Feature | Description |
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| Modeled Protein | Template Structure |
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+----------<<< P R O C H E C K S U M = M A R Y >>>----------+ | = | | /var/www/html/Services/SAVES_3/jobs/784980/Q4Q0Q0.pdb 2.0 197 = residues | | = | | Ramachandran plot: 96.0% core 4.0% allow 0.0% gener 0.0% = disall | | = | | All Ramachandrans: 0 labelled residues (out of 195) = | | Chi1-chi2 plots: 0 labelled residues (out of 120) = | | = | | Main-chain params: 6 better 0 inside 0 worse = | | Side-chain params: 5 better 0 inside 0 worse = | | = | | Residue properties: Max.deviation: 2.2 Bad contacts: = 0 | +| Bond len/angle: 4.6 Morris et al class: 1 = 1 2 | +| 1 cis-peptides = | | G-factors Dihedrals: 0.11 Covalent: -0.08 Overall: = 0.04 | | = | | M/c bond lengths: 99.7% within limits 0.3% highlighted = | | M/c bond angles: 94.6% within limits 5.4% highlighted = | | Planar groups: 100.0% within limits 0.0% highlighted = | | = | = +------------------------------------------------------------------------= ----+ + May be worth investigating further. * Worth investigating further. |