Registration No.: 15PIP426
Name: G Siva Kumar
Ph.D. Thesis Title:
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Research: 8
Kumar GS, Sobhia ME. Water network chemistry to exploit the nature of catalytic water molecules in Mtb DNA gyrase: a computational study to understand the binding mechanism of fluoroquinolones. Journal of Biomolecular Structure and Dynamics 2024, 42: 725-733.
Tivari SR, Kokate SV, Delgado-Alvarado E, Gayke MS, Kotmale A, Patel H, Ahmad I, Sobhia ME, Kumar SG, Lara BG, Jain VD, Jadeja Y. A novel series of dipeptide derivatives containing indole-3-carboxylic acid conjugates as potential antimicrobial agents: the design, solid phase peptide synthesis, in vitro biological evaluation, and molecular docking study. RSC Advances 2023, 13: 24250-24263.
Kumar GS, Sobhia ME, Ghosh K. Binding affinity analysis of quinolone and dione inhibitors with Mtb-DNA gyrase emphasising the crystal water molecular transfer energy to the protein–ligand association. Molecular Simulation 2022, 48: 631-646.
Kumar GS, Singh H, Sobhia ME. Structure Based Insights into the Association of Fluoroquinolones with Mycobacterial DNA-Gyrase Complexes. Journal of Bioinformatics and Systems Biology 2021, 4: 103-116.
Sobhia ME, Ghosh K, Sivangula S, Kumar GS. Deciphering covid-19 enigma by targeting sars-cov-2 main protease using in-silico approaches. International Journal of Pharmaceutical Sciences and Research 2021, 12: 3104-3119.
Sobhia ME, Kumar GS, Sivangula S, Ghosh K, Singh H, Haokip T, Gibson J. Rapid structure-based identification of potential SARS-CoV-2 main protease inhibitors. Future Medicinal Chemistry 2021, 13: 1435-1450.
Kumar G, Godavari AG, Tambat R, Kumar S, Nandanwar H, Sobhia ME, Jachak SM. Synthesis, biological evaluation and computational studies of acrylohydrazide derivatives as potential Staphylococcus aureus NorA efflux pump inhibitors. Bioorganic Chemistry 2020, 104: 104225.
Shinde RN, Kumar GS, Eqbal S, Sobhia ME. Screening and identification of potential PTP1B allosteric inhibitors using in silico and in vitro approaches. PLoS One 2018, 13: e0199020.
Review: 2
Sobhia ME, Ghosh K, Kumar GS, Sivangula S, Laddha K, Kumari S, Kumar H. The Role of Water Network Chemistry in Proteins: A Structural Bioinformatics Perspective in Drug Discovery and Development. Current Topics in Medicinal Chemistry 2022, 22: 1636-1653.
Sobhia ME, Kumar GS, Mallick A, Singh H, Kumar K, Chaurasiya M, Singh M, Gera N, Deverakonda S, Baghel V. Computational and Biological Investigations on Abl1 Tyrosine Kinase: A Review. Current Drug Targets 2021, 22: 38-51.
Books/Book Chapters: 0